TABLE 3.
Quality and coverage statistics of plasmid genome sequencing.
Plasmid | Raw reads (pair) | Clean reads (pair) | Q20 (%) | Q30 (%) | Target plasmid reads (pair) | Coverage |
p11106 | 5,581,280 | 5,567,524 | 95.94 | 91.06 | 1,523,524 (27.3%) | 7,109 |
p12 | 4,562,335 | 4,551,783 | 95.05 | 89.62 | 1,157,414 (25.4%) | 5,401 |
p243323 | 4,707,263 | 4,695,911 | 96.24 | 91.56 | 967,971 (20.6%) | 4,517 |
p32 | 7,672,469 | 7,653,464 | 96.09 | 91.27 | 1542,915 (20.1%) | 7,200 |
p7-1973 | 3,549,640 | 3,541,667 | 93.99 | 87.93 | 909,991 (25.6%) | 2,316 |