Table 2.
Parameter settings for MaxQuant search.
| Parameters | Value |
|---|---|
| Enzyme | Trypsin |
| Static modification | C-carboxyamidomethylation (57.021 Da) |
| Dynamic modification | M oxidation (15.995 Da); |
| N-terminal TMT 9 plex | |
| Species | Homo sapiens |
| Precursor ion mass tolerance | +15 ppm |
| Fragmentation mass tolerance | +20 MMU |
| Max missed cleavages | 2 |