Skip to main content
. 2020 Apr 30;11:857. doi: 10.3389/fmicb.2020.00857

TABLE 3.

Biosynthetic gene clusters as predicted by antiSMASH in the nine Pseudomonas genomes are shown here.

Region Type From To Most similar known cluster
R32 Region 1 NRPS-like 108,600 137,959 Mangotoxin
Region 2 arylpolyene 301,125 344,738 APE Vf
Region 3 NRPS 1,763,102 1,815,679 Pyoverdine
Region 4 NRPS 3,581,365 3,648,859 Pyoverdine
R47 Region 1 NRPS-like 114,171 144,819 Mangotoxin
Region 2 arylpolyene 499,588 543,208 APE Vf
Region 3 other 4,075,994 4,117,076 Pyrrolnitrin
Region 4 NRPS, resorcinol 4,846,097 4,925,365 Pyoverdine
Region 5 NRPS 4,969,815 5,022,843 Pyoverdine
R76 Region 1 NRPS-like 159,850 202,848 Mangotoxin
Region 2 arylpolyene 525,506 569,081 APE Vf
Region 3 NRPS 2,841,936 2,945,551 Viscosin
Region 4 NRPS 3,563,564 3,604,450 Pyochelin
Region 5 NRPS 4,364,529 4,407,587 Poaeamide
Region 6 NRPS 4,766,660 4,819,556 Pyoverdine
R84 Region 2 NRPS-like 131,789 161,456 Mangotoxin
Region 3 arylpolyene 499,287 542,891 APE Vf
Region 4 NRPS, terpene 2,169,525 2,234,015 Pyoverdine
Region 5 NRPS 2,763,610 2,840,351 Anikasin
Region 6 NRPS 4,533,076 4,586,074 Pyoverdine
S04 Region 1 arylpolyene 423,375 467,009 APE Vf
Region 2 NRPS 2,828,784 2,901,359 Pyoverdine
Region 3 terpene 4,329,654 4,350,538 Pyoverdine
S19 Region 1 arylpolyene 423,375 467,009 APE Vf
Region 2 NRPS 2,828,790 2,901,365 Pyoverdine
Region 3 terpene 4,329,659 4,350,543 Pyoverdine
S34 Region 1 NRPS-like 96,203 125,383 Mangotoxin
Region 2 arylpolyene 431,851 475,456 APE Vf
Region 3 NRPS 4,344,492 4,408,473 Pyoverdine
Region 4 NRPS 4,455,540 4,508,538 Pyoverdine
S35 Region 1 NRPS-like 109,236 150,641 Mangotoxin
Region 2 arylpolyene 474,763 518,338 APE Vf
Region 3 terpene, NRPS 2,731,917 2,858,142 Viscosin
Region 4 NRPS 4,185,638 4,230,966 WLIP
Region 5 NRPS 4,576,688 4,629,596 Pyoverdine
S49 Region 1 NRPS-like 120,934 150,633 Mangotoxin
Region 2 arylpolyene 473,010 516,614 APE Vf
Region 3 NRPS 2,191,853 2,267,429 Pyoverdine
Region 4 NRPS 3,906,071 3,982,443 Anikasin
Region 5 NRPS 4,658,162 4,711,160 Pyoverdine

For each region, the biosynthetic cluster type, the genomic boundaries (in bp) and the most similar known biosynthetic gene cluster are shown.