Key resources table.
| Reagent type (species) or resource |
Designation | Source or reference | Identifiers | Additional information |
|---|---|---|---|---|
| Genetic reagent Arabidopsis thaliana | pPIN1:PIN1-GFP (Col-0) | Benková et al., 2003 | ||
| Genetic reagent Arabidopsis thaliana | pCLV3:mCherry-NLS (Col-0) | Pfeiffer et al., 2016 | ||
| Genetic reagent Arabidopsis thaliana |
pYUC1-11:GFP
(Col-0) |
Liu et al., 2016; Robert et al., 2013 | ||
| Genetic reagent (Arabidopsis thaliana) | yuc1 yuc4/+ pDR5rev::GFP (Col-0) | Robert et al., 2013 | ||
| Genetic reagent (Arabidopsis thaliana) | ett-22 (Col-0) | Pekker et al., 2005 | ||
| Genetic reagent (Arabidopsis thaliana) | pid-14 (Col-0) | Huang et al., 2010 | ||
| Genetic reagent Arabidopsis thaliana | pRPS5a:DII-VENUS-N7-p2A-TagBFP-SV40 (Col-0) | This study | qDII | Request to teva.vernoux@ens-lyon.fr |
| Genetic reagent Arabidopsis thaliana | pDR5rev:2x-mTurquoise2-SV40 (Col-0) | This study | Request to teva.vernoux@ens-lyon.fr | |
| Chemical compound, drug | Trichostatin A | Invivogen | met-tsa-1 | 0.005 mM |
| Chemical compound, drug | Indole-3-acetic acid sodium salt | Sigma-Aldrich | I5148 | 0.2, 1.0, 5.0 mM |
| Software, algorithm | RStudio | RStudio Team, 2015 | RRID:SCR_000432 | |
| Software, algorithm | Image J | RRID:SCR_003070 | https://imagej.net | |
| Software, algorithm | NumPy | RRID:SCR_008633 | http://www.numpy.org | |
| Software, algorithm | SciPy | Virtanen et al., 2020 | RRID:SCR_008058 | http://www.scipy.org |
| Software, algorithm | VTK | Schroeder et al., 2006 | RRID:SCR_015013 | http://www.vtk.org |
| Software, algorithm | scikit-image | van der Walt et al., 2014 | http://scikit-image.org | |
| Software, algorithm | sam_spaghetti | This study Cerutti et al., 2020 |
https://gitlab.inria.fr/mosaic/publications/sam_spaghetti/ | |
| Other | Propidium iodide solution | Sigma-Aldrich | P4864 | 0.1 mM |