Table 2. Diversity and richness indices for faecal bacterial communities for the two groups across the 11 study days.
Study day | SED | Benjamini-Hochberg P-value | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Group | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | Day | Group | D*G | Day | Group | D*G | |
Shannon | C | 5.661 | 5.571 | 5.499 | 5.453 | 5.744 | 5.672 | 5.682 | 5.885 | 5.800 | 5.809 | 5.79 | 0.11 | 0.30 | 0.25 | 0.85 | 0.82 | 0.17 |
A | 5.813 | 5.842 | 5.908 | 5.798 | 5.834 | 5.916 | 5.845 | 5.825 | 5.778 | 5.638 | 5.628 | |||||||
Simpson | C | 0.956 | 0.955 | 0.950 | 0.950 | 0.968 | 0.963 | 0.963 | 0.978 | 0.971 | 0.975 | 0.975 | 0.007 | 0.02 | 0.02 | 0.85 | 0.82 | 0.17 |
A | 0.974 | 0.973 | 0.974 | 0.967 | 0.978 | 0.984 | 0.975 | 0.972 | 0.972 | 0.966 | 0.961 | |||||||
Chao1 | C | 3190 | 3331 | 3132 | 3446 | 3244 | 3150 | 3247 | 3073 | 3090 | 3258 | 2971 | 251.6 | 272 | 397.7 | 0.85 | 0.82 | 0.83 |
A | 3100 | 2985 | 3289 | 3303 | 3108 | 2897 | 3295 | 3130 | 3620 | 2775 | 2943 | |||||||
S.obs | C | 1729 | 1686 | 1664 | 1717 | 1777 | 1715 | 1744 | 1759 | 1734 | 1702 | 1715 | 68.62 | 135.1 | 132.1 | 0.85 | 0.82 | 0.83 |
A | 1652 | 1708 | 1770 | 1698 | 1638 | 1668 | 1784 | 1741 | 1714 | 1554 | 1596 |
Mean diversity indices (Simpson’s and Shannon-Weiner), species observed (S.Obs) and estimated species richness (S.Chao1) for fecal samples collected over the 11 study days (final 3 days hay feeding and 8 days hay plus barley feeding) between the two groups (C, Control; A, Aged). SED: standard error of the difference.