Table 1. Clinical data and sequencing results of each patient.

A total of 23 echinococcosis patients were involved in the study. Plasma samples were performed with ELISA tests and cell-free DNA sequencing. Lesion samples from surgery patients were performed with PCR tests.

Patient characteristics			Diagnosis characteristics			Cell-free DNA sequencing
ID	Gender	Age (Year)	Clinical Typea	Lesion samples (PCR)	Plasma samples (ELISA)	Raw Data (PE)b	Clean Data (PE)b	Echinococcus Reads (PE)b	Echinococcus RPMc	Echinococcus species
S1	Male	34	CL	E. multilocularis	positive	742,927,842	615,603,566	11140	18.096	E. multilocularis
S2	Female	61	CE3	E. granulosus	positive	281,355,103	246,691,600	2	0.008	E. granulosus
S3	Female	30	CE1, CE4	E. granulosus	positive	250,618,825	227,517,883	3	0.013	E. granulosus
S4	Male	30	CE3	E. granulosus	positive	280,431,941	249,457,697	17	0.068	E. granulosus
S5	Male	40	CE3	E. granulosus	positive	279,312,347	248,762,189	1	0.004	E. granulosus
S6	Female	29	CE1	E. granulosus	positive	308,530,827	274,958,461	4	0.015	E. granulosus
S7	Female	44	CE2	E. granulosus	positive	263,251,023	236,679,083	2	0.008	E. granulosus
S8	Male	29	CE2	E. granulosus	positive	360,137,779	313,971,836	17	0.054	E. granulosus
S9	Male	15	CL	E. granulosus	negative	351,412,640	320,738,789	37	0.115	E. granulosus
S10	Female	30	CE2	E. granulosus	positive	306,363,351	269,830,299	13	0.048	E. granulosus
S11	Female	43	CL	E. granulosus	positive	262,203,537	231,673,428	173	0.747	E. granulosus
S12	Female	10	CL	E. granulosus	positive	231,127,477	205,492,100	1	0.005	E. granulosus
S13	Female	58	CE3	E. granulosus	positive	245,838,225	219,082,144	15	0.068	E. granulosus
S14	Female	36	CE1	E. granulosus	negative	256,759,640	224,126,469	13	0.058	E. granulosus
N1	Female	46	CE1, CE4	NA	positive	244,658,087	205,140,224	116	0.565	E. granulosus
N2	Female	59	CE2	NA	positive	364,203,245	281,310,703	129	0.459	E. granulosus
N3	Male	35	CE2, CE4	NA	positive	289,831,896	171,116,167	367	2.145	E. granulosus
N4	Male	58	CE5	NA	negative	367,706,652	213,450,366	540	2.530	E. granulosus
N5	Male	14	CE5	NA	positive	248,171,648	203,853,580	125	0.613	E. granulosus
N6	Male	47	CE5	NA	negative	211,410,500	153,887,667	234	1.521	E. granulosus
N7	Male	27	CE1	NA	negative	132,535,233	114,252,814	15	0.131	E. granulosus
N8	Female	49	CE2	NA	positive	117,991,568	104,563,714	10	0.096	E. granulosus
N9	Female	41	CE4	NA	negative	83,740,668	73,423,055	18	0.245	E. granulosus

^a Clinical Type: CL, Cystic lesion. CE1-5, Cystic echinococcosis clinical stage.

^b PE: Paired-end Reads.

^c RPM: Read-Pairs Per Million.