Antibodies: Flow cytometry |
Ter119 – biotin labeled |
B D Bioscience |
51-09082J |
B220 - biotin labeled |
B D Bioscience |
51-09082J |
B220 – PECy7 |
B D Bioscience |
552772 |
Gr-1 - biotin labeled |
B D Bioscience |
51-09082J |
Gr-1 – AF700 |
B D Bioscience |
557979 |
Gr-1 - FITC |
Biolegend |
108419 |
Mac1 - biotin labeled |
B D Bioscience |
51-09082J |
Mac1 – AF700 |
B D Bioscience |
557960 |
Mac1 - FITC |
B D Bioscience |
553310 |
CD3e - biotin labeled |
B D Bioscience |
51-09082J |
CD3e - APC |
B D Bioscience |
561826 |
CD3e - PE |
B D Bioscience |
553048 |
CD8 - APC |
B D Bioscience |
553035 |
CD8 - PE |
B D Bioscience |
553032 |
Streptavidin – V500 |
B D Bioscience |
561419 |
Streptavidin – APCCy7 |
B D Bioscience |
554063 |
Sca-1 - PECy7 |
B D Bioscience |
558162 |
c-Kit – APCef780 |
Invitrogen |
47-1171-82 |
c-Kit -PE |
B D Bioscience |
553355 |
CD48 – AF700 |
Biolegend |
103426 |
CD48 - FITC |
B D Bioscience |
557484 |
CD48 – BV605 |
B D Bioscience |
740353 |
CD150 - FITC |
eBioscinece |
11-1501-82 |
CD150 - PE |
eBioscinece |
12-1501-82 |
CD150 - APC |
Invitrogen |
17-1501-81 |
CD45.2 – percpcy5.5 |
B D Bioscience |
552950 |
CD45.2 – AF700 |
B D Bioscience |
560693 |
CD45.2 - FITC |
B D Bioscience |
553772 |
CD34 – ef450 |
eBioscinece |
48-0341-82 |
CD16/32 |
Invitrogen |
12-0161-82 |
CD45.1 - PE |
B D Bioscience |
553776 |
CD45.1 – BV605 |
B D Bioscience |
563010 |
H2Kd - FITC |
B D Bioscience |
553565 |
H2Kd - PE |
B D Bioscience |
553566 |
CD45 – APCCy7 |
B D Bioscience |
557659 |
Anti-Drp1 |
abcam |
Ab56788 |
|
|
|
Mitotracker dyes: Flow cytometry |
TMRE |
Sigma- Aldrich |
87917 |
MitoSox™ red |
Invitrogen |
M36008 |
Mitotracker™ green FM |
Invitrogen |
M7514 |
|
|
|
Antibodies: Microscopy / Imaging |
tomm20 |
Abcam |
ab186734 |
drp-1 |
BD transduction laboratories |
611112 |
alpha tubulin |
Abcam |
ab18251 |
anti-rabbit – AF488 |
Invitrogen |
A21206 |
anti-rabbit AF546 |
Life technologies |
A11010 |
anti-mouse AF555 |
Life technologies |
A21422 |
|
|
|
Chemicals |
Polyinosinic:polycytidylic acid |
GE health care |
Tlrl-pic |
Doxycycline |
Sigma- Aldrich |
D9891-25G |
Sucrose |
Sigma- Aldrich |
501212905 |
Mdivi-1 |
Sigma- Aldrich |
M0199 |
DMSO |
Fisher Scientific |
BP231-100 |
Rotenone |
Sigma- Aldrich |
R8875 |
Oligomycin |
Sigma- Aldrich |
75351 |
Ficol histopcque |
Sigma- Aldrich |
10831 |
Paraformaldehyde |
Electron Microscopy Sciences |
15713 |
Triton X-100 |
Sigma-Aldrich |
X10-100ml |
Bovine serum albumin |
Roche |
3117332001 |
SlowFade gold antifade mountant with DAPI |
Invitrogen |
S36939 |
Fetal bovine serum |
Atlanta |
S11550 |
Fetal bovine serum |
Omega |
FB-01 |
Diffquick staining |
Siemens |
B4132-A |
|
|
|
Media: |
Stemspan medium |
Stem cell technology |
9650 |
Hank’s buffered saline solution |
|
21-020-CV |
Iscove’s Modified Dulbeco’s medium |
|
10-016-CV |
|
|
|
Cytokines: |
|
|
Murine stem cell factor |
Peprotech |
250-03 |
Murine thrombopoietin |
Peprotech |
315-14 |
Human granulocyte colony stimulating factor |
|
GF05-20ug |
Murine interleukin-3 |
Peprotech |
213-13 |
Erythropoietin |
Espogen |
NDC55513-126-10 |
|
|
|
Experimental Models: Strains |
C57BI/6 |
In house, CCHMC |
n/a |
B6.SJL-Ptprca (BoyJ) |
In house, CCHMC |
n/a |
Transgenic R26-M2rtTA;Col1a1-tetO-H2B-GFP |
Jackson laboratories |
016836 |
B6;129S-403 Gt(ROSA)26Sortm1.1(CAG-COX8A/Dendra2)Dcc |
Jackson laboratories |
018397 |
Drp1flox/flox mice |
Dr. Hiromi Sesaki laboratory |
n/a |
MxCre1 mice |
In house, CCHMC |
n/a |
NOD/SCID gammac−/−
|
In house, CCHMC |
n/a |
Deposited Data. |
RNA-seq data |
This paper |
GSE141472 |
Software and Algorithms |
FlowJo |
FlowJo™ Software |
https://www.flowjo.com/ |
GraphPad Prism 5.0 |
GraphPad Software Inc. |
http://www.graphpad.com/scientific-software/prism/ |
ImageJ |
NIH |
https://imagej.nih.gov/ij/ |
Imaris |
Oxford Instruments |
https://imaris.oxinst.com |
AltAnalyze |
Emig, et al |
http://www.altanalyze.org |
Toppgene |
Chen et al |
https://toppgene.cchmc.org |
EnrichR |
Chen et al; Kuleshov et al |
https://amp.pharm.mssm.edu/Enrichr/ |