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. 2020 Mar 20;21(6):794–807. doi: 10.1111/mpp.12931

TABLE 3.

List of primers used for real‐time quantitative reverse transcription PCR and in vitro double stranded RNA synthesis

Gene product Primer name and sequence (5ʹ–3ʹ) Amplicon size (bp)
Glycine max Ubiquitin‐3 U3F GTGTAATGTTGGATGTGTTCCC 107
U3R ACACAATTGAGTTCAACACAAACCG
P. pachyrhizi α‐tubulin TUBF CCAAGGCTTCTTCGTGTTTCA 67
TUBR CAAGAGAAGAGCGCCAAACC
TaqMan probe 5ʹ FAM–3ʹ Blackhole1 TCGTTTGGAGGCGGATCGGTTCA  
CytB_1_F TCAAGACGCATCCAATTCTAGGTC 89
CytB_1_R GTGTTACACCCGTGATAATCTGAATGAT
PPATC_F GAGGAGCTGCAAATGGGTGA 115
PPATC_R GAATGGGGATGGCAGCATCA
PP_Un_3_F CGGATCTCAGGATCTCACACG 91
PP_Un_3_R GCCAGCTCTCCAGGCTTAAA
PP_GCS_H_F AGCCGTCGAGAGTGTCAAAG 110
PP_GCS_H_R AGATTGGCCTGGTCGCTTAG
PP_RP_S16_F AAATTTGGAGGAAAGGGAGCACG 89
PP_RP_S16_R ACAGCAGGAAATAAAAACCCAAACC
P. pachyrhizi ATC dsRNA ATC_T7_F GCGTAATACGATCCATCATAGGGAGAGTTTCCATCGATGATGGCATTC 741
ATC_T7_R GCGTAATACGATCCATCATAGGGAGA CTAGCAAGCCAAACCATAAGC
P. pachyrhizi GCS_H dsRNA GCS_H_T7_F GCGTAATACGATCCATCATAGGGAGAAAACCATCGTAATCTGCCCG 420
GCS_H_T7_R GCGTAATACGATCCATCATAGGGAGATCCTCTCCTTCACAATGAGCT
P. pachyrhizi RP_S16 dsRNA RP_S16_T7_F GCGTAATACGATCCATCATAGGGAGACCAGCCTCACAAAACGTTCA 500
RP_S16_T7_R GCGTAATACGATCCATCATAGGGAGAAACCCAAACCTCCATCAACG