5mC	5-methylcytosine
αSMA	α smooth muscle actin
ACDRP	Amish Complex Disease Research Program
ACLY	ATP citrate lyase
ALA	α-lipoic acid
ALT	Alanine Aminotransferase
APO C3	Apolipoprotein C3
APOE	Apolipoprotein E
b3AR	Adrenergic receptor
BCAA	Branched-Chain Amino Acid
BPA	Bisphenol A
CASP1	Caspase 1
CBMN	Cytokinesis-block micronucleus assay
CCL4	Carbon Tetrachloride
Cdkn1a	Cyclin Dependent Kinase Inhibitor 1A
ChDD	Choline-deficient diet
Col1A1	Collagen Type I α1
CPT1A	Carnitine Palmitoyltransferase 1A
CRISPR/Cas9	Clustered regularly interspaced short palindromic repeats
Cyp7A1	Cholesterol 7-α hydroxylase 1
DHA	Docosahexaenoic acid
DNL	De novo lipogenesis
DNMTs	DNA methyltransferases
ELISA	Enzyme-linked immunosorbent assay
ER	Endothelial Reticulum
EPA	Eicosapentanoic acid
EZH2	Enhancer of Zeste Homolog 2
FASN	Fatty acid synthetase
FATP1	Fatty acid transporter 1
FA	Fatty Acid
FFA	Free Fatty Acid
FGF19	Fibroblast Growth Factor 19
FGFR2	Fibroblast growth factor receptor 2
FOXO1	Forkhead box O1
GCKR	Glucokinase Regulatory Protein
GIFT	Genetically Improved Farmed Tilapia
GSTM1	Glutathione S-transferase Mu 1
GSTT1	Glutathione S-transferase theta 1
GWAS	Genome-wide association study
H3K9	Lysine 9 acetylation of histone H3
H3K36	Lysine 36 acetylation of histone H3
H3Me2K4	Lysine 4 dimethylation at histone H3
HAT	Histone acetyltransferase
HCC	Hepatocellular Carcinoma
HDAC8	Histone Deacetylase 8
HFD	High Fat Diet
HFrD	high-fructose diet
HF/HS	High-Fat/High-Sucrose
HFS	High Fat Sucrose
HSCs	Hepatic Stellate Cells
HSD11B	11β-hydroxysteroid dehydrogenase
iPOP	Integrated personal omic profile
IR	Insulin Resistance
IUGR	Intrauterine Grow Restriction
JHDM2A	Jumonji C (JmjC)-Domain-containing Histone Demethylase 2A
LDL	Low-density lipoprotein
LKB1/AMPK	Liver Kinase B1/AMP-activated Protein Kinase
LP	Low protein
LPIAT1	Lyso-phosphatidylinositol acyl-transferase1
LPL	Lipoprotein lipase activity
LPS	Lipopolysaccharides
LXRα	Liver X receptor alpha
Lyso-PI	Lyso-phosphatidylinositol
MAM	Mitochondria-associated membrane
MBOAT7	Membrane Bound O-acyltransferase Domain-containing 7
MCD	Methionine-Choline Deficient diet
MedDiet	Mediterranean diet
MetS	Metabolic Syndrome
miRNAs	microRNAs
MMP	Matrix Metalloproteinase
mtDNA	Mitochondrial DNA
MTHFR	Methylenetetrahydrofolate reductase
MT-ND6	Mitochondrially encoded NADH dehydrogenase 6
MTTP	Microsomal triglyceride transfer protein
MUFA	Monounsaturated fatty acid
Myd88	Myeloid differentiation factor 88
NAFLD	Nonalcoholic Fatty Liver Disease
NAS	NAFLD activity score
NASH	Nonalcoholic Steatohepatitis
NC	Normal Chow
NF-κB	Nuclear Factor Kappa-Light-Chain-Enhancer of Activated B Cells
NIOR	Nutrient-induced insulin output ratio
NMR	Nuclear Magnetic Resonance
PA	Palmitic acid
PCG1-α	Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
PCSK7	Proprotein Convertase Subtilisin/Kexin Type 7
PCSK9	Proprotein Convertase Subtilisin/Kexin Type 9
PDGFα	Platelet-derived growth factor alpha
PMBCs	Peripheral blood mononuclear cells
PNPLA2	Patatin-like Phospholipase Domain Protein 2
PNPLA3	Patatin-like Phospholipase Domain Protein 3
PPARα	Peroxisome proliferator-activated receptor α
PPARγ 2	Peroxisome proliferator-activated receptor γ2
PPP1R3B	Protein Phosphatase 1 Regulatory subunit 3B
PUFA	Polyunsaturated fatty acids
RNAseq	RNA sequencing
ROS	Reactive Oxygen Species
SAM	S-adenyl methionine
SCD	Stearoyl-CoA Desaturase
SCFAs	Short Chain Fatty Acids
SFA	Saturated fatty acid
Sirt	Sirtuin
SNPs	Single nucleotide polymorphisms
SOD	Superoxide Dismutase
SREBP1c	Sterol Regulatory Element Binding Protein 1c
SULT1A1	Sulfotransferase 1A1
T2D	Type 2 Diabetes Mellitus
TA	Tannic acid
TG	Triglycerides
TGFβ1	Transforming growth factor β1
TLR4	Toll-like receptor 4
TM6SF2	Transmembrane 6 Superfamily Member 2
TMC4/MBOAT7	Transmembrane Channel-like 4/Membrane Bound O-acyltransferase Domain-containing
TNFα	Tumor Necrosis Factor alpha
UCP-1	Uncoupling Protein type I
VLDL	Very-low density lipoprotein
WNT	Wingless-related integration site