| Ago2 | Argonaute-2 |
| ALKBH5 | AlkB homolog 5 |
| ANRIL | Antisense non-coding RNA in the INK4 locus |
| ARE | Arginine/uridine-rich RNA element |
| AUF1 | ARE/poly(U)-binding/degradation factor 1 |
| CAF1-NOT | Chromatin assembly factor 1–Negative on TATA |
| CCR4–NOT | Carbon catabolite repressor 4–Negative on TATA |
| ceRNA | Competitive endogenous RNA |
| circRNA | Circular RNA |
| CNOT1 | CCR4–NOT transcription Complex Subunit 1 |
| CREB | cAMP response element-binding protein |
| CRM1 | Chromosomal maintenance 1 |
| eRNA | Enhancer RNA |
| FISH | Fluorescent in situ hybridization |
| FTO | Fat mass and obesity-associated protein |
| GRSF1 | G-rich RNA sequence-binding factor 1 |
| HCC | Hepatocellular carcinoma |
| HGBC | Highly expressed in gallbladder carcinoma |
| hMTR4 | mRNA transport 4 |
| hnRNPC | Heterogeneous nuclear ribonucleoprotein C |
| hnRNPK | Heterogeneous nuclear ribonucleoprotein K |
| HOTAIR | HOX antisense intergenic RNA |
| hRRP44 | Ribosomal RNA processing 44 |
| hRRP6 | Ribosomal RNA processing 6 |
| HULC | Highly up-regulated in liver cancer |
| HuR | Human antigen R |
| IGF2BP1 | Insulin-like growth factor 2 mRNA-binding protein 1 |
| KH | hnRNP-K homology |
| lincRNA | Long intergenic non-coding RNA |
| lncRNA | Long non-coding RNA |
| M6A | N6-methyladenosine |
| MALAT1 | Metastasis-associated lung adenocarcinoma transcript 1 |
| MEG3 | Maternally expressed 3 |
| METTL14 | Methyltransferase-like 14 |
| METTL3 | Methyltransferase-like 3 |
| mRNP | Messenger ribonucleoprotein |
| ncRNA | Non-coding RNA |
| NEAT1 | Nuclear-enriched abundant transcript 1 |
| NES | Nuclear export signal |
| NEXT | Nuclear exosome targeting |
| PABPN1 | Polyadenylate-binding protein 1 |
| PAR-CLIP | Photoactivatable ribonucleoside enhanced crosslinking and immunoprecipitation |
| PAXT | Poly(A) tail exosome targeting |
| PNPase | Polynucleotide phosphorylase |
| PRC2 | Polycomb repressive complex 2 |
| RBM7 | RNA-binding motif 7 |
| RBP | RNA-binding protein |
| RIP | RNA immunoprecipitation |
| RISC | RNA-induced silencing complex |
| RMRP | RNA component of mitochondrial RNA processing endoribonuclease |
| RNase MRP | Mitochondrial RNA-processing endoribonuclease |
| RNA-seq | RNA-sequencing |
| RNP | Ribonucleoprotein |
| RRM | RNA recognition motif |
| RT-qPCR | Quantitative reverse transcription PCR |
| SHG60 | Small nucleolar RNA, C/D box 60 host gene |
| SINE | Short interspersed element |
| SIRLOIN | SINE-derived nuclear RNA localization |
| siRNA | Small interfering RNA |
| SKIV2L2 | Superkiller viralicidic activity 2-like 2 |
| SNORD60 | Small nucleolar RNA, C/D box 60 |
| SOCS2 | Suppressor of cytokine signaling 2 |
| SRSF1 | Serine/arginine-rich splicing factor 1 |
| TDP-43 | Transactive response DNA binding protein 43 kDa |
| TIM | Translocase of the inner mitochondrial membrane |
| TOM | Translocase of the outer mitochondrial membrane |
| TTP | Tristetraprolin |
| TUG1 | Taurine upregulated 1 |
| WTAP | Wilm’s tumor 1-associated protein |
| YTHDF2 | YTH N6-methyladenosine RNA-binding protein 2 |
| ZFC3H1 | Zinc finger C3H1-type containing |