Table 2:
Genome assembly statistics (for sequences >1 kb) for all assemblies
| No. | Assembly | No. scaffolds (%) | % genome ≥25 kb | Longest scaffold (Mb) | Contig N50 (kb) | Scaffold N50 (Mb) | Assembly size (Gb) | ||
|---|---|---|---|---|---|---|---|---|---|
| >100 kb | >1 Mb | >39 Mb | |||||||
| A1 | w2rap | 6,290 (10.7) | 176 (0.3) | 0 | 94.9 | 2.52 | 182.93 | 0.30 | 2.47 |
| A2 | w2rap + lmp | 1,680 (4.9) | 682 (2.0) | 0 | 94.8 | 15.65 | 271.16 | 2.62 | 2.60 |
| A3 | 10x | 1,023 (3.9) | 501 (1.9) | 0 | 93.3 | 32.15 | 207.98 | 5.26 | 2.46 |
| A4 | 10x + lmp | 669 (4.2) | 346 (2.2) | 3 | 94.7 | 58.16 | 210.72 | 10.33 | 2.50 |
| A5 | w2rap + bionano | 4,361 (7.7) | 626 (1.1) | 0 | 93.8 | 6.89 | 182.93 | 0.85 | 2.66 |
| A6 | w2rap + lmp + bionano | 990 (3.0) | 468 (1.4) | 0 | 94.8 | 34.30 | 271.16 | 5.73 | 2.60 |
| A7 | 10x + bionano | 604 (2.3) | 336 (1.3) | 3 | 97.5 | 46.79 | 207.98 | 10.84 | 2.48 |
| A8 | 10x + lmp + bionano | 409 (2.6) | 218 (1.4) | 9 | 97.6 | 104.38 | 210.72 | 21.01 | 2.50 |
| A9 | w2rap + 10x | 1,097 (2.4) | 467 (1.0) | 0 | 97.6 | 35.44 | 182.93 | 5.58 | 2.47 |
| A10 | w2rap + lmp + bionano + 10x | 447 (1.4) | 235 (0.7) | 6 | 97.5 | 65.13 | 271.16 | 14.05 | 2.60 |
Percentage scores refer to percentage of scaffolds greater than a given threshold. The quantity 39 Mb is the size of the smallest chromosome in a recent chromosome-scale assembly of a closely related mustelid and hence an indication of the number of chromosome-sized scaffolds. A more thorough list of genome statistics can be found in Supplementary Table S2.