Table II:

RRMS’s for different coarse grained models.^a

Model	Cytosine	Guanine	Thymine	Adenine	Total vdW and total elec.	Total
1 (3333)	22.4	30.5	61.8	46.5	37.8	40.6
	30.0	31.6	31.2	31.5	31.0
2 (3344)	22.3	30.4	36.7	45.9	31.3	33.1
	29.8	31.7	23.9	26.9	28.2
3 (3345)	22.3	30.3	37.0	43.0	30.9	32.6
	29.8	31.7	23.9	23.9	27.5
4 (3444)	22.2	27.6	37.4	45.6	30.4	31.1
	29.9	27.4	23.9	26.8	26.5
5 (3445)	22.2	27.5	37.6	43.1	30.0	30.7
	29.8	27.4	23.9	23.9	25.8
6 (4344)	21.3	29.9	36.7	45.7	30.9	33.0
	24.8	31.8	23.9	26.8	27.2
7 (4345)	21.4	29.8	37.1	43.0	30.5	32.5
	24.8	31.8	23.9	23.9	26.5
8 (4444)	21.2	27.4	37.3	45.4	30.1	31.0
	24.8	27.4	23.9	26.9	25.4
9 (4445)	21.2	27.4	37.4	43.4	29.8	30.6
	24.8	27.4	23.9	23.9	24.6

^aThe electrostatic potential RRMS’s computed for each of four bases are shown in columns 2–5 in normal type. The Van der Waals energy RRMS’s for pairs of like bases (e.g., G-G, C-C etc.) are shown in columns 2–5 in bold-face type. The total electrostatic potential RRMS’s for all 4 bases, and the total van der Waals energy-RRMS’s for all 10 possible pairs of interacting molecules are shown in the next-to-last column in normal and bold face type, respectively. The total-energy RRMS’s for all 10 possible pairs of interacting molecules are shown in the last column. All RRMS’s are computed according to equations (18a,b,c) as explained in “Results and Discussion”.