TABLE 1.
Origins and allelic profiles of the 41 G. candidum strains analyzed.
| Strain | Geo complex | Lineage | ST | Allele |
Origina | References | |||||
| ALA1 | CDC19 | SAPT4 | GLN4 | PGI1 | PGM2 | ||||||
| 15 | A | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | Mold-ripened cheese, Canada | Alper et al., 2011 |
| 20 | A | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | Mold-ripened cheese, Canada | Alper et al., 2011 |
| 21 | C | 1 | 3 | 2 | 3 | 2 | 2 | 2 | 3 | Clotted carrot, Japan | Guéguen and Jacquet, 1982 |
| 28 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Mold-ripened cheese, Canada | Alper et al., 2011 |
| 34 | A | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | Mold-ripened cheese, Spain | Alper et al., 2011 |
| 37 | A | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | Smear cheese, France | Alper et al., 2011 |
| 38 | A | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | Mold-ripened cheese, France | Alper et al., 2011 |
| 39 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Smear cheese, France | Alper et al., 2011 |
| 40 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Smear cheese, France | Dieuleveux et al., 1997 |
| 48 | B | 4 | 5 | 1 | 1 | 2 | 3 | 2 | 4 | Bioreactor contaminant | Alper et al., 2011 |
| 70 | C | 1 | 3 | 2 | 3 | 2 | 2 | 2 | 3 | Smear cheese, Canada | Alper et al., 2011 |
| 73 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Smear cheese, France | Gente et al., 2002a, b, 2006 |
| 74 | B | 4 | 6 | 1 | 4 | 2 | 1 | 3 | 5 | Grass, France | Gente et al., 2002a, b, 2006 |
| 75 | B | 4 | 7 | 1 | 5 | 2 | 1 | 4 | 4 | Corn silage, France | Gente et al., 2002a, b, 2006 |
| 76 | A | 5 | 8 | 1 | 1 | 1 | 1 | 2 | 4 | Milk, France | Gente et al., 2002b, 2006 |
| 77 | A | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | Milk, France | Gente et al., 2002b, 2006 |
| 244 | C | 4 | 9 | 3 | 3 | 2 | 4 | 2 | 6 | Milk, Canada | Lavoie et al., 2012 |
| 317 | B | 4 | 10 | 4 | 4 | 2 | 3 | 2 | 7 | Organic milk, Canada | Lavoie et al., 2012 |
| 436 | A | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | Industrial strain–company A | Alper et al., 2011 |
| 562 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Milk, MPP 1, Canada | Lavoie et al., 2012 |
| 563 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Milk, Canada | Lavoie et al., 2012 |
| 645 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Smear cheese, Canada | Lavoie et al., 2012 |
| 655 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Mold-ripened cheese, Canada | Lavoie et al., 2012 |
| 664 | B | 4 | 11 | 4 | 4 | 2 | 1 | 2 | 4 | Milk, MPP 1, Canada | Lavoie et al., 2012 |
| 690 | B | 4 | 12 | 5 | 6 | 2 | 1 | 4 | 7 | Milk, MPP 3, Canada | Lavoie et al., 2012 |
| 1024 | A | 3 | 13 | 5 | 1 | 1 | 1 | 1 | 1 | Industrial strain–company B | Alper et al., 2011 |
| 1025 | A | 3 | 13 | 5 | 1 | 1 | 1 | 1 | 1 | Industrial strain–company B | Alper et al., 2011 |
| 1026 | A | 4 | 14 | 1 | 1 | 1 | 1 | 2 | 8 | Industrial strain–company B | Alper et al., 2011 |
| 1028 | A | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | Industrial strain–company A | Alper et al., 2013 |
| 1031 | A | 3 | 13 | 5 | 1 | 1 | 1 | 1 | 1 | Industrial strain–company A | Alper et al., 2013 |
| 1032 | A | 3 | 13 | 5 | 1 | 1 | 1 | 1 | 1 | Industrial strain–company A | Alper et al., 2013 |
| 1033 | A | 3 | 13 | 5 | 1 | 1 | 1 | 1 | 1 | Industrial strain–company A | Alper et al., 2013 |
| 1034 | A | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | Industrial strain–company A | Alper et al., 2013 |
| 1035 | C | 1 | 15 | 3 | 4 | 2 | 2 | 2 | 3 | Industrial strain–company A | Alper et al., 2013 |
| 1036 | A | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | Industrial strain–company A | Alper et al., 2013 |
| 1037 | A | 3 | 13 | 5 | 1 | 1 | 1 | 1 | 1 | Industrial strain–company A | Alper et al., 2013 |
| 1038 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Industrial strain–company A | Alper et al., 2013 |
| 1039 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Industrial strain–company A | Alper et al., 2013 |
| 1040 | A | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 4 | Industrial strain–company A | Alper et al., 2013 |
| 1041 | A | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | Industrial strain–company A | Alper et al., 2013 |
| 1146 | A | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | Artisanal sheep cheese, Slovakia | CBS 11176 |
aMPP: Milk Production Plant. Bold: Strains sequenced in this study.