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. 2020 May 7;11:804. doi: 10.3389/fmicb.2020.00804

TABLE 1.

Strains, plasmids and primers used in this study.

Strain, plasmid and primer Relevant characteristics and/or plasmid construction* Usage Source
Bacteria
E. coli
JM109 F′ [traD36 proAB+lacIqlacZΔM15]/recA1 supE44 endA1 hsdR17 gyrA96 relA1 thi-1 mcrA (lac-proAB) Gene cloning Promega
S17-1 hsdR17 (rK- mK-) recA RP4-2 (Tcr:Mu-Kmr:Tn7 Strr) Conjugation Chen et al., 2010b
TransforMax EC100 + F-mcrA Δ(mrr-hsdRMS-mcrBC) Φ80dlacZΔM15 ΔlacX74 recA1 endA1 araD139 Δ(ara, leu)7697 galU galK λ-rpsL (Strr) nupG Recovering the transposon Epicenter
E. anophelis
Ag1 WT, isolated from mosquito A. gambiae RNAseq and genetic analysis Kukutla et al., 2014
SCH814 Reporter strain; Kmr(Emr) Luciferase labeled strain Chen et al., 2015
SCH908 Reporter strain for Elilysin2 gene; Kmr(Emr) Luciferase labeled strain for hemolysin gene expression assay This study
SCH1065 ΔiucA_iucC/iucB/iucD Siderophore synthesis mutant This study
Plasmids
pYT313 Suicide vector with Ampr(Emr) Deletion vector for E. anophelis Zhu et al., 2017
pSCH893 T-easy vector carrying the promoter of hemolysin gene; Ampr Cloning upstream gene fragment of hemolysin gene This study
pSCH801 Transposon with the luciferase reporter; Kmr(Emr) Transposon for delivering reporter gene in E. anophelis Chen et al., 2015
pSCH905 Reporter gene fused with hemolysin gene promoter Reporter plasmid This study
pSCH1038 Upstream fragment of siderophore synthesis gene cluster on T-easy vector; Ampr Cloning This study
pSCH1033 Downstream fragment of siderophore synthesis gene cluster on T-easy vector; Ampr Cloning This study
pSCH1034 Suicide vector for deletion of iucA_iucC/iucB/iucD; Ampr(Emr) Gene knockout This study
Primers
Walker183 ACCCGGG TGTTCTTAAGACTTTTGAAGCAGG Hemolysin promoter forward primer amplification
Walker185 AGGATCC TAGTTGTTAGAACTGCTTTTGTAGAAGC Hemolysin promoter reverse primer amplification
Walker277 GGATCCTGCAGCCTCATCTATGTTCTGG Upstream fragment amplification for deletion of siderophore genes
Walker278 GTCGACCCTGAATCGGAAACCTTCTGTGCC Upstream fragment amplification for deletion of siderophore genes
Walker285 GTCGACCCTATATCTTTACCGATGTATTCGATTG Downstream fragment amplification for deletion of siderophore genes
Walker 287 GCATGCGATATAATCCTGGCAGAATTCCGGTC Downstream fragment amplification for deletion of siderophore genes
Walker297 CTATTACCAGCAAACAGTACAAGAC Forward primer for iucA for confirmation of gene loss
Walker298 CTTTACCAAGTCCCAGTATGCTGG Reverse primer for iucA confirmation of gene loss
Walker299 CCGCCAGGTTTTCCTGAAGAC Forward primer for iucB for confirmation of gene loss
Walker300 TTCTATTGCCCACTGACAATAC Reverse primer for iucB confirmation of gene loss
Walker301 GATGTGCATTCAATAAGAAAGAC Forward primer for iucC for confirmation of gene loss
Walker302 CCACCCACTGATTAATAGCC Reverse primer for iucC confirmation of gene loss
Walker295 CTTACAGCAGAACATACTCCGG Forward primer for screening mutants
Walker296 CAACTCTTGGGGGTTGTTATCC Reverse primer for screening mutants

*Antibiotic resistance phenotype: Ampr, ampicillin resistance; Kmr, kanamycin resistance; Emr, erythromycin resistance. Unless indicated otherwise, antibiotic resistance phenotypes are those expressed in E. coli. Antibiotic resistance phenotypes in parentheses are those expressed in E. anophelis strains but not in E. coli.