Table 4.
Luminal Site |
TBE (Kcal/mol) |
RMSD Mean / Var |
α3 | β4 | Homologous residues a |
M2 Position (nng) |
|
---|---|---|---|---|---|---|---|
α9 | α10 | ||||||
High-affinity | −14.31 | 2.30 / 0.02 | I246* | V248 | V248 | 5′ | |
S248* | T249 | T249 | 6′ (Ser) | ||||
L249 | L251 | L251 | 8′ | ||||
L250 | L251 | L252 | L252 | 9′ (Leu) | |||
S251 | A252 | A253 | A253 | 10′ | |||
T253 | T254 (H-bond donor) | T255 | T255 | 12′ | |||
V254 | F255 | V256 | V256 | 13′ (Val) | |||
F255(Cation-π) | F256 | F257 | F257 | 14′ | |||
L258 | L259 | L259 | 16′ | ||||
Low-affinity | −4.27 | 2.55 / 0.07 | G239 | G240 | G241 | G241 | −3′ (Gly) |
E240 | E241 | E242 | E242 | −2′ | |||
V242 | M243 | V244 | V244 | 1′ | |||
T243 | T244 | S245 | S245 | 2′ (Thr) | |||
L245 | L246 | L246 | 3′ | ||||
1246* | 1247 | V248 | V248 | 5′ | |||
S247 | S248* | T249 | T249 | 6′ (Ser) |
Residues from the high- and low-affinity sites belong to different α3 and β4 indicating no overlapping between both sites.
The homologous residues at α9 and α10 subunits are also included for comparative purposes.