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. 2020 Apr 23;25(8):1964. doi: 10.3390/molecules25081964

Table 4.

Molecular docking binding affinities on antibacterial targets.

Est. Binding Energy (kcal/mol)
Comp. Gyrase
1KZN
Thymidylate Kinase
4QGG
E. coli MurB 2Q85 E. coli MurB 1-H
E. coli MurB
Residues
E. coli MurB
4a −1.28 - −6.25 −23.74 1 Arg158
4b −6.22 −2.69 −9.84 −30.42 2 Ser228
4c −4.36 - −7.15 −26.71 2 Arg158, Arg213
4d −4.19 - −8.10 −28.22 2 Arg158, Arg213
4e −5.10 −2.41 −8.17 −28.36 2 Ser228, Arg213
4f −4.07 - −7.11 −26.55 2 Arg158, Arg213
4g −6.25 −3.14 −10.08 −31.16 2 Gly122, Ser228
4h −7.09 −4.66 −11.25 −33.49 3 Arg158, Ser228, Asn232
4i −5.28 - −7.70 −27.11 2 Tyr189, Ser228
5a −3.65 −3.27 −6.88 −24.79 2 Arg158, Tyr189
5b −7.15 −4.19 −12.33 −36.27 3 Ser228, Ala226
5c −5.13 −2.26 −8.25 −28.41 2 Ser228, Arg213
5d −6.92 −3.27 −10.51 −31.44 2 Gly122, Ser228
5e −6.20 - −9.82 −30.71 2 Ser228, Ala226
5f −4.32 - −7.14 −26.58 2 Arg158, Arg213
5g −7.00 −4.11 −11.28 −33.42 3 Arg158, Ser228, Asn232
5h −5.87 −3.15 −8.75 −28.98 2 Gly122, Ser228
5i - - −5.73 −20.75 - -
5j −2.55 - −5.77 −20.86 1 Arg213
5k −5.84 −3.11 −8.67 −28.33 2 Gly122, Ser228