Table 1.
Characteristic | ssSNPBLUP_Liu (Plink)a | ssSNPBLUP_Liu (DP)b | ssSNPBLUP_MSc |
---|---|---|---|
Number of iterations | 3,358 | 3,359 | 6,334 |
Smallest eigenvalue | |||
Largest eigenvalue | 3.813 | 3.813 | 5.194 |
Spectral condition number | |||
Software peak memory (MB)d | 18,120.7 | 89,615.7 | 27,780.3 |
assSNPBLUP model proposed by Liu et al. [9] and using the Plink 1 binary form; or b using double precision reals; cssSNPBLUP model proposed by Mantysaari and Stranden [11] and using the Plink 1 binary form; dThe software peak memory is defined as the peak resident size (VmHWM) obtained from the Linux /proc virtual file system