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. 2020 May 13;52:24. doi: 10.1186/s12711-020-00543-9

Table 1.

Characteristics of different ssSNPBLUP systems

Characteristic ssSNPBLUP_Liu (Plink)a ssSNPBLUP_Liu (DP)b ssSNPBLUP_MSc
Number of iterations 3,358 3,359 6,334
Smallest eigenvalue 2.30410-6 2.30410-6 1.98910-6
Largest eigenvalue 3.813 3.813 5.194
Spectral condition number 1.655106 1.655106 2.612106
Software peak memory (MB)d 18,120.7 89,615.7 27,780.3

assSNPBLUP model proposed by Liu et al. [9] and using the Plink 1 binary form; or b using double precision reals; cssSNPBLUP model proposed by Mantysaari and Stranden [11] and using the Plink 1 binary form; dThe software peak memory is defined as the peak resident size (VmHWM) obtained from the Linux /proc virtual file system