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. 2019 Aug 10;28(1):169–185. doi: 10.1007/s10499-019-00451-w

Table 3.

LAMP methods for detecting AHPND

Type (method) Primers (5’-3’) Size Reference
LAMP-A3 Assay FIB: GTATTGAATGGTAAGCTCCCCGGAAGTCGGTCGTAGTGT 40bp Kongrueng et al. (2015)
BIP: AATGGGGTGCGCCATTTATGAAGTTTCATCACGTTGTACC 40bp
F3: GCAAACATACACCTATCATCC 21bp
B3: GCATTATCAGGGCGTTGT 18bp
LF: ACGTCCCGTATTCTCAATGTCT 22bp
LB: GCTGGCGGCTGGAAAGT 17bp
LAMP-AuNP Assay F3-EMS: GTGCAATTTAATAGGAGAACATC 23bp Arunrut et al. (2016)
B3-EMS: GAATGGTAAGCTCCCCAC 18bp
FIP-EMS: CGTTTGGTTCGACAGTCCAATTTTTATGAGTAACAATATAAAACATGA 48bp
BIP-EMS: GAGGCGTCACAGAAGTAGACATTTTCCCGTATTCTCAATGTCTACAC 47bp
LF-EMS: CGTGAGAATAGTCAGTT 17bp
LB-EMS: ACATACACCTATCATCCCGGAAG 23bp
Probe-Thiol-EMS: (SH)A10-ATCATCCCGGAAGTCGGTCG 30bp
AHPND-LAMP Assay F3: TGATAATGCATTCTATCATCAGC 23bp Koiwai et al. (2016)
B3: ATTTGAAAGACCAAATGAAACC 22bp
FIP:
F1c: GTGAGCACCTTCTTAGTGGTAATA 24bp
F2: GTTGTAATTAACAATGGCGCTAG 23bp
BIP:
B1c: TGACGGAATTTAACCCTAACAATGC 25bp
B2: GCTTTGAAAGCATAGTTAGGATC 23bp