Table 1.
Primers used for amplification of selected regions of the genes encoding the HCV E2, core, NS3, and E1 proteins and the peptide P1 by PCR
Region/ endonucleases | Sense primer | Antisense primer |
---|---|---|
E2 (408-560) XbaI/HindIII/XhoI |
5´-TCTAGAAGTCAGAAAATCCA -3´ | 5´- CTCGAGAAGCTTGAACCCAGTGCTATT-3´ |
Core (110-160) HindIII/XhoI |
5´-AAGCTTACTGACCCCCGGCGTAG -3´ | 5´- CTCGAGGTCCTCCAGAACCCGGA-3´ |
NS3 (1230-1433) XbaI/EcoRI/XbaI |
5´- GCTCTAGATGCTCCCACTGGCAGCGGC-3´ | 5´-CTCTAGAGAATTCAACGACGTCTCCGATAGT -3´ |
NS3 (1230-1341) XhoI/XhoI |
5´- CTCGAGGCTCCCACTGGCAGCGG-3´ | 5´- CTCGAGCGGCGCTCCAGCCGTCT -3´ |
E1 (190-222) HindIII/EcoV/XhoI |
5´- AAGCTTGATATCTCCGCCTATGAGGTG-3´ | 5´-AAGCTTCTCGAGCATGATCATGTCGTC-3´ |
P1 XhoI/XhoI |
5’-TTACATCTCGAGCTGCCCGAGTACGTGATC-3’ | 5-TTACATCTCGAGGGCGCGGCTGGGCAGCTT-3’ |