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. 2020 Feb 3;165(3):593–607. doi: 10.1007/s00705-019-04464-x

Table 1.

Primers used for amplification of selected regions of the genes encoding the HCV E2, core, NS3, and E1 proteins and the peptide P1 by PCR

Region/ endonucleases Sense primer Antisense primer

E2 (408-560)

XbaI/HindIII/XhoI

5´-TCTAGAAGTCAGAAAATCCA -3´ 5´- CTCGAGAAGCTTGAACCCAGTGCTATT-3´

Core (110-160)

HindIII/XhoI

5´-AAGCTTACTGACCCCCGGCGTAG -3´ 5´- CTCGAGGTCCTCCAGAACCCGGA-3´

NS3 (1230-1433)

XbaI/EcoRI/XbaI

5´- GCTCTAGATGCTCCCACTGGCAGCGGC-3´ 5´-CTCTAGAGAATTCAACGACGTCTCCGATAGT -3´

NS3 (1230-1341)

XhoI/XhoI

5´- CTCGAGGCTCCCACTGGCAGCGG-3´ 5´- CTCGAGCGGCGCTCCAGCCGTCT -3´

E1 (190-222)

HindIII/EcoV/XhoI

5´- AAGCTTGATATCTCCGCCTATGAGGTG-3´ 5´-AAGCTTCTCGAGCATGATCATGTCGTC-3´

P1

XhoI/XhoI

5’-TTACATCTCGAGCTGCCCGAGTACGTGATC-3’ 5-TTACATCTCGAGGGCGCGGCTGGGCAGCTT-3’