Table 1.
Characteristics | Training set | Testing set 1 | Testing set 2 |
---|---|---|---|
Source | TCGA | GSE31210 | GSE68465 |
Sample size | 400 | 219 | 356 |
Platform | RNA-seq | Affymetrix Human Genome U133 Plus 2.0 Array |
Affymetrix Human Genome U133A Array |
AJCC stage | |||
IA | 130 (32.5) | 112 (51.1) | 112 (31.5) |
IB | 143 (35.8) | 53 (24.2) | 155 (43.5) |
II | — | 54 (24.7) | — |
IIA | 57 (14.2) | — | 24 (6.7) |
IIB | 70 (17.5) | — | 65 (18.3) |
Age group | |||
≤ 65 | 190 (47.5) | 170 (77.6) | 186 (52.2) |
> 65 | 201 (50.2) | 49 (22.4) | 170 (47.8) |
Smoking history | |||
Non-smoker | 57 (14.2) | 112 (51.1) | 40 (11.2) |
Ever-smoker | 333 (83.2) | 107 (48.9) | 243 (68.3) |
Unknown | 10 (2.5) | — | 73 (20.5) |
Gender | |||
Male | 177 (45.6) | 103 (46.4) | 175 (49.2) |
Female | 211 (54.4) | 119 (53.6) | 181 (50.8) |
Survival status | |||
Alive | 273 (68.2) | 186 (84.9) | 189 (53.1) |
Dead | 127 (31.8) | 33 (15.1) | 167 (46.9) |
Genome alteration | |||
≤ 0.2 | 170 (42.5) | — | — |
> 0.2 | 229 (57.2) | — | — |
Unknown | 1 (0.2) | — | — |
Values in parentheses are percentages.