Table 2.
Clustered miRNAs differentially expressed in DLD1 and HT29 cells cultivated in multicellular spheroids.
| Cell line | Chromosome | miRNA Cluster | Regulation |
|---|---|---|---|
| DLD1 | 1 | miR-200a/b/429 | ↑ |
| miR-30c-1/30e | ↑ | ||
| miR-181-a1/b1 | ↑ | ||
| miR-29c/29b-2 | ↑ | ||
| 3 | miR-425/191 | ↑ | |
| 7 | miR-182/96/183 | ↑ | |
| miR-29a/29b-1 | ↑ | ||
| 8 | miR-30b/30d | ↑ | |
| 9 | let-7a/let-7f-1/let-7d | ↑ | |
| miR-23b/27b/24-1 | ↑ | ||
| miR-181a-2/181b-2 | ↑ | ||
| 11 | miR-192/194-2/6750/6749 | ↑ | |
| 12 | miR-200c/141 | ↑ | |
| 13 | miR-17/18a/19a/20a/19b-1/92a-1 | ↑ | |
| 19 | miR-24-2/27a/23a | ↑ | |
| 22 | let-7a/4763/let-7b | ↑ | |
| X | miR-221/222 | ↓ | |
| miR-532/188/500a/362/501/500b/660/502 | ↓ | ||
| HT29 | 1 | miR-215/194 | ↑ |
| 19 | miR-23a/27a/24-2 | ↑ |
Note: miRNA cluster was denoted as differentially expressed if at least two clustered leading strand miRNAs were significantly up- or down-regulated in a 3D-dependent manner.