Table 1.

Taxa used in this study and their GenBank accession numbers. New sequences generated in the present study are in bold.

Taxa	Strain No. 1	GenBank Accession Numbers 2					References
		LSU	SSU	RPB2	ITS	TEF
Acrospermum adeanum	M133	EU940104	EU940031	EU940320	EU940180	-	Stenroos et al. [26]
Acrospermum compressum	M151	EU940084	EU940012	EU940301	EU940161	-	Stenroos et al. [26]
Acrospermum gramineum	M152	EU940085	EU940013	EU940302	EU940162	-	Stenroos et al. [26]
Alternaria alternata	KFRD-18	KX609781	KX609769	-	KX346897	KY094931	Li et al. [27]
Alternariaster bidentis	CBS 134021	KC609341	-	KC609347	KC609333	-	Alves et al. [28]
Antennariella placitae	CBS:124785	GQ303299	-	-	MH863403	-	Cheewangkoon et al. [29]
Arxiella dolichandrae	CBS 138853	KP004477	-	-	KP004449	-	Crous et al. [30]
Arxiella terrestris	CBS 268.65	MH870201	-	-	MH858565	-	Vu et al. [31]
Asterina fuchsiae	TH590	GU586216	GU586210	-	-	-	Hofmann et al. [32]
Asterina phenacis	TH589	GU586217	GU586211	-	-	-	Hofmann et al. [32]
Bambusicola massarinia	MFLUCC 11-0389	JX442037	JX442041	KU940169	JX442033	-	Dai et al. [33]
Bambusicola splendida	MFLUCC 11-0439	JX442038	JX442042	-	JX442034	-	Dai et al. [33]
Botryosphaeria agaves	MFLUCC 11-0125	JX646808	JX646825	-	JX646791	JX646856	Liu et al. [34]
Botryosphaeria tsugae	AFTOL-ID 1586	DQ767655	-	DQ767644	-	DQ677914	Schoch et al. [35]
Calicium salicinum	CBS 100898	KF157982	KF157970	KF157998	-	-	Beimforde et al. [36]
Calicium viride	10-VII-1997 (DUKE)	AF356670	AF356669	AY641031	-	-	Lutzoni et al. [37]
Camarosporium quaternatum	CBS 483.95	GU301806	GU296141	GU357761	KY929149	GU349044	Schoch et al. [38]
Capnodium salicinum	AFTOL-ID 937	DQ678050	DQ677997	-	-	DQ677889	Schoch et al. [37]
Caryospora minima	-	EU196550	EU196551	-	-	-	Cai and Hyde [39]
Chaetothyriothecium elegans	CPC 21375	KF268420	-	-	-	-	Hongsanan et al. [40]
Corynespora cassiicola	CBS 100822	GU301808	GU296144	GU371742	-	GU349052	Schoch et al. [38]
Corynespora smithii	CABI 5649b	GU323201	-	GU371783	-	GU349018	Schoch et al. [38]
Cucurbitaria berberidis	MFLUCC 11-0387	KC506796	KC506800	-	-	-	Hyde et al. [41]
Cyphelium inquinans	Tibell 22283 (UPS)	AY453639	U86695	-	AY450584	-	Tibell [42]
Cyphelium tigillare	Tibell 22343 (UPS)	AY453641	AF241545	-	AY452497	-	Tibell [42]
Cystocoleus ebeneus	L161	EU048578	EU048571	-	-	-	Muggia et al. [43]
Didymella exigua	CBS 183.55	JX681089	EU754056	GU371764	MH857436	KR184187	Verkley et al. [44]
Didymosphaeria rubi-ulmifolii	MFLUCC 14-0023	KJ436586	KJ436588	-	-	-	Ariyawansa et al. [45]
Dothiora cannabinae	AFTOL ID 1359	DQ470984	DQ479933	DQ470936	-	DQ471107	Spatafora et al. [46]
Dyfrolomyces phetchaburiensis	MFLUCC 15-0951	MF615402	MF615403	-	-	-	Hyde et al. [47]
Dyfrolomyces rhizophorae	BCC15481	-	KF160009	-	-	-	Pang et al. [48]
Dyfrolomyces rhizophorae	JK 5456A	GU479799	-	-	-	GU479860	Suetrong et al. [49]
Dyfrolomyces thailandica	MFLU 16-1173	KX611366	KX611367	-	-	-	Hyde et al. [50]
Dyfrolomyces thamplaensis	MFLUCC 15-0635	KX925435	KX925436	-	-	KY814763	Zhang et al. [51]
Dyfrolomyces tiomanensis	NTOU3636	KC692156	KC692155	-	-	KC692157	Pang et al. [48]
Elsinoe fawcettii	CPC 18535	JN940382	JN940559	-	KX887207	KX886853	Schoch et al. [52]
Elsinoe verbenae	CPC 18561	JN940391	JN940562	-	KX887298	KX886942	Schoch et al. [53]
Extremus antarcticus	CCFEE 5312	KF310020	-	KF310086	KF309979	-	Egidi et al. [54]
Gonatophragmium triuniae	CBS 138901	KP004479	-	-	KP004451	-	Crous et al. [30]
Helicascus nypae	BCC 36751	GU479788	GU479754	GU479826	-	GU479854	Suetrong et al. [49]
Julella avicenniae	BCC 20173	GU371822	GU371830	GU371786	-	GU371815	Schoch et al. [38]
Karschia cezannei	Cezanne-Eichler B26	KP456152	-	-	-	-	Ertz and Diederich [55]
Katumotoa bambusicola	KT 1517a	AB524595	AB524454	AB539095	NR_154103	AB539108	Tanaka et al. [56]
Labrocarpon canariense	Ertz 16907 (BR)	KP456157	-	-	-	-	Ertz and Diederich [55]
Lentithecium fluviatile	CBS 123090	FJ795450	FJ795492	FJ795467	-	-	Zhang et al. [57]
Leptodiscella africana	CBS 400.65	MH870275	-	-	MH858635	-	Vu et al. [31]
Leptodiscella brevicatenata	FMR 10885	FR821311	-	-	FR821312	-	Madrid et al. [58]
Leptodiscella chlamydospora	MUCL 28859	FN869567	-	-	FR745398	-	Madrid et al. [58]
Leptodiscella rintelii	CBS 144927	LR025181	-	-	LR025180	-	Papendorf [52]
Leptosphaeria doliolum	MFLUCC 15-1875	KT454719	KT454734	-	KT454727	-	Ariyawansa et al. [59]
Leptosphaerulina australis	CBS 317.83	EU754166	GU296160	GU371790	MH861604	GU349070	de Gruyter et al. [60]
Leptoxyphium cacuminum	MFLUCC10-0049	JN832602	JN832587	-	-	-	Chomnunti et al. [61]
Lophiotrema nucula	CBS 627 86	GU301837	GU296167	GU371792	LC194497	GU349073	Schoch et al. [38]
Lophium mytilinum	AFTOL-ID 1609	DQ678081	DQ678030	DQ677979	-	DQ677926	Schoch et al. [35]
Massarina bambusina	H 4321	AB807536	AB797246	-	LC014578	AB808511	Tanaka et al. [56]
Massarina eburnea	CBS 473.64	GU301840	GU296170	GU371732	-	GU349040	Schoch et al. [38]
Melanomma pulvis-pyrius	CBS 371 75	GU301845	FJ201989	GU371798	-	GU349019	Schoch et al. [38]
Melaspileopsis cf. diplasiospora	Ertz 16247 (BR)	KP456164	-	-	-	-	Ertz and Diederich [55]
Melomastia maolanensis	GZCC 16-0102	KY111905	KY111906	-	-	KY814762	Zhang et al. [51]
Microsphaeropsis olivacea	CBS 233 77	GU237988	-	KT389643	MH861055	-	Aveskamp et al. [62]
Microthyrium buxicola	MFLUCC 15-0213	KT306552	KT306550	-	-	-	Ariyawansa et al. [63]
Microthyrium microscopicum	CBS 115976	GU301846	GU296175	GU371734	-	GU349042	Schoch et al. [44]
Multiseptospora thailandica	MFLUCC 11-0183	KP744490	KP753955	-	KP744447	KU705657	Liu et al. [64]
Murispora rubicunda	IFRD 2017	FJ795507	GU456308	-	-	GU456289	Zhang et al. [57]
Muyocopron alcornii	BRIP 43897	MK487708	-	MK492712	MK487735	MK495956	Hernández-Restrepo et al. [22]
Muyocopron atromaculans	MUCL 34983	MK487709	-	MK492713	MK487736	MK495957	Hernández-Restrepo et al. [22]
Muyocopron castanopsis	MFLUCC 10-0042	-	JQ036225	-	-	-	Mapook et al. [23]
Muyocopron castanopsis	MFLUCC 14-1108	KU726965	KU726968	KY225778	MT137784	MT136753	Mapook et al. [23]
Muyocopron chromolaenae	MFLUCC 17-1513	MT137876	MT137881	MT136761	MT137777	MT136756	Mapook et al. [24]
Muyocopron chromolaenicola	MFLUCC 17-1470	MT137877	MT137882	-	MT137778	MT136757	Mapook et al. [24]
Muyocopron coloratum	CBS 720.95	MK487710	-	MK492714	NR_160197	MK495958	Hernández-Restrepo et al. [22]
Muyocopron dipterocarpi	MFLUCC 14-1103	KU726966	KU726969	KY225779	MT137785	MT136754	Mapook et al. [23]
Muyocopron dipterocarpi	MFLUCC 17-0075	MH986833	MH986829	-	MH986837	-	Senwanna et al. [65]
Muyocopron dipterocarpi	MFLUCC 17-0354	MH986834	MH986830	-	MH986838	-	Senwanna et al. [65]
Muyocopron dipterocarpi	MFLUCC 17-0356	MH986835	MH986831	-	MH986839	-	Senwanna et al. [66]
Muyocopron dipterocarpi	MFLUCC 18-0470	MK348001	MK347890	-	MK347783	-	Jayasiri et al. [67]
Muyocopron garethjonesii	MFLU 16-2664	KY070274	KY070275	-	-	-	Tibpromma et al. [68]
Muyocopron geniculatum	CBS 721.95	MK487711	-	MK492715	MK487737	MK495959	Hernández-Restrepo et al. [22]
Muyocopron heveae	MFLUCC 17-0066	MH986832	MH986828	-	MH986836	-	Senwanna et al. [66]
Muyocopron laterale	CBS 141029	MK487712	-	MK492716	MK487738	MK495960	Hernández-Restrepo et al. [22]
Muyocopron laterale	IMI 324533	MK487713	-	MK492717	MK487739	MK495961	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 719.95	MK487714	-	MK492718	MK487740	MK495962	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 141033	MK487715	-	MK492719	MK487741	MK495963	Hernández-Restrepo et al. [22]
Muyocopron laterale	URM 7802	MK487716	-	MK492720	MK487742	MK495964	Hernández-Restrepo et al. [22]
Muyocopron laterale	URM 7801	MK487717	-	MK492721	MK487743	-	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 127677	MK487718	-	MK492722	MK487744	MK495965	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 145310	MK487719	-	MK492723	MK487745	MK495966	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 145315	MK487720	-	MK492724	MK487746	MK495967	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 145313	MK487721	-	MK492725	MK487747	MK495968	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 145309	MK487722	-	MK492726	MK487748	MK495969	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 145314	MK487723	-	MK492727	MK487749	MK495970	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 145311	MK487724	-	MK492728	MK487750	-	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 145312	MK487725	-	MK492729	MK487751	MK495971	Hernández-Restrepo et al. [22]
Muyocopron laterale	CBS 145316	MK487726	-	MK492730	MK487752	MK495972	Hernández-Restrepo et al. [22]
Muyocopron laterale	FMR13797	MK874616	-	MK875802	MK874615	MK875803	Hernández-Restrepo et al. [22]
Muyocopron lithocarpi	MFLUCC 10-0041	JQ036230	JQ036226	-	-	-	Mapook et al. [23]
Muyocopron lithocarpi	MFLUCC 14-1106	KU726967	KU726970	KY225780	MT137786	MT136755	Mapook et al. [23]
Muyocopron lithocarpi	MFLU 18-2087	MK347930	MK347821	-	MK347716	-	Jayasiri et al. [66]
Muyocopron lithocarpi	MFLU 18-2088	MK347931	MK347822	-	MK347717	-	Jayasiri et al. [66]
Muyocopron lithocarpi	MFLUCC 16-0962	MK348034	MK347923	-	-	-	Jayasiri et al. [66]
Muyocopron lithocarpi	MFLUCC 17-1465	MT137878	MT137883	-	MT137779	MT136758	Mapook et al. [24]
Muyocopron lithocarpi	MFLUCC 17-1466	MT137879	MT137884	-	MT137780	MT136759	Mapook et al. [24]
Muyocopron lithocarpi	MFLUCC 17-1500	MT137880	MT137885	MT136762	MT137781	MT136760	Mapook et al. [24]
Muyocopron zamiae	CBS 203.71	MK487727	-	MK492731	-	MK495973	Hernández-Restrepo et al. [22]
Mycoleptodiscus endophytica	MFLUCC 17-0545	MG646946	MG646978	-	MG646961	MG646985	Tibpromma et al. [69]
Mycoleptodiscus suttonii	CBS 276.72	MK487728	-	MK492732	MK487753	MK495974	Hernández-Restrepo et al. [22]
Mycoleptodiscus suttonii	CBS 141030	MK487729	-	MK492733	-	MK495975	Hernández-Restrepo et al. [22]
Mycoleptodiscus terrestris	CBS 231.53	MK487730	-	MK492734	MK487754	MK495976	Hernández-Restrepo et al. [22]
Mycoleptodiscus terrestris	IMI 159038	MK487731	-	MK492735	MK487755	MK495977	Hernández-Restrepo et al. [22]
Myriangium duriaei	CBS 260.36	NG_027579	AF242266	KT216528	MH855793	-	Schoch et al. [35]
Myriangium hispanicum	CBS 247.33	GU301854	GU296180	GU371744	MH855426	GU349055	Schoch et al. [38]
Mytilinidion rhenanum	CBS 135.34	FJ161175	FJ161136	FJ161115	-	FJ161092	Boehm et al. [70]
Natipusilla decorospora	AF236 1a	HM196369	HM196376	-	-	-	Ferrer et al. [71]
Natipusilla naponensis	AF217 1a	HM196371	HM196378	-	-	-	Ferrer et al. [71]
Neocochlearomyces chromolaenae	BCC 68250	MK047514	MK047552	-	MK047464	MK047573	Crous et al. [21]
Neocochlearomyces chromolaenae	BCC 68251	MK047515	MK047553	-	MK047465	MK047574	Crous et al. [21]
Neocochlearomyces chromolaenae	BCC 68252	MK047516	MK047554	-	MK047466	MK047575	Crous et al. [21]
Neocylindroseptoria pistaciae	CBS 471.69	KF251656	-	KF252161	KF251152	KF253112	Quaedvlieg et al. [65]
Neomycoleptodiscus venezuelense	CBS 100519	MK487732	-	MK492736	MK487756	MK495978	Hernández-Restrepo et al. [22]
Palawania thailandensis	MFLUCC 14-1121	KY086493	KY086495	KY086496	MT137787	-	Mapook et al. [24]
Palawania thailandensis	MFLU 16-1871	KY086494	-	-	MT137788	-	Mapook et al. [24]
Paramycoleptodiscus albizziae	CPC 27552	MH878220	-	-	-	-	Vu et. al. [31]
Paramycoleptodiscus albizziae	CBS 141320	KX228330	-	MK492737	KX228279	MK495979	Crous et. al. [72]
Phaeodimeriella cissampeli	MFLU 16-0558	KU746806	KU746808	KU746810	-	KU746812	Mapook et. al. [73]
Phaeodimeriella dilleniae	MFLU 14-0013	KU746805	KU746807	KU746809	-	KU746811	Mapook et. al. [73]
Phaeotrichum benjaminii	CBS 541.72	AY004340	AY016348	GU357788	MH860561	DQ677892	Lumbsch et. al. [74]
Physcia aipolia	AFTOL-ID 84	DQ782904.1	DQ782876	DQ782862	DQ782836	DQ782892	James et. al. [75]
Piedraia hortae	CBS 480.64	GU214466	-	KF902289	GU214647	-	Crous et. al. [76]
Platystomum crataegi	MFLUCC 14-0925	KT026109	KT026113	-	NG_063580	KT026121	Thambugala et. al. [77]
Pleomassaria siparia	AFTOL-ID 1600	DQ678078	DQ678027	DQ677976	-	DQ677923	Schoch et. al. [35]
Pleospora herbarum	IT 956	KP334709	KP334729	KP334733	KP334719	KP334731	Ariyawansa et. al. [78]
Preussia funiculata	CBS 659.74	GU301864	GU296187	GU371799	-	GU349032	Schoch et. al. [38]
Pseudomassariosphaeria bromicola	IT-1333	KT305994	KT305996	-	KT305998	KT305999	Ariyawansa et. al. [63]
Pseudopalawania siamensis	MFLUCC 17-1476a	-	MT137789	-	MT137782	MT136752	This study
Pseudopalawania siamensis	MFLUCC 17-1476b	-	MT137790	-	MT137783	-	This study
Pseudostrickeria muriformis	MFLUCC 13-0764	KT934254	KT934258	-	-	KT934262	Tian et. al. [79]
Pseudovirgaria grisea	CPC 19134	JF957614	-	-	JF957609	-	Braun et. al. [80]
Pseudovirgaria hyperparasitica	CPC 10753	EU041824	-	-	EU041767	-	Arzanlou et. al. [81]
Ramularia endophylla	CBS 113265	KF251833	-	KP894673	KF251220	-	Verkley et. al. [82]
Rasutoria pseudotsugae	rapssd	EF114704	EF114729	-	EF114687	-	Winton et al. [83]
Rasutoria tsugae	ratstk	EF114705	EF114730	GU371809	EF114688	-	Winton et al. [83]
Salsuginea ramicola	KT 2597.1	GU479800	GU479768	GU479833	-	GU479861	Suetrong et al. [49]
Schizothyrium pomi	CBS 406.61	EF134949	-	KF902384	-	-	Batzer et al. [84]
Setoapiospora thailandica	MFLUCC 17-1426	MN638847	MN638851	-	MN638862	MN648731	Hyde et al. [85]
Stictographa lentiginosa	Ertz 17570 (BR)	KP456170	-	-	-	-	Ertz and Diederich [55]
Sympoventuria capensis	CBS 120136	KF156104	KF156094	-	KF156039	-	Samerpitak et al. [86]
Teratosphaeria fibrillosa	CBS 121707	GU323213	GU296199	GU357767	MH863138	KF903305	Schoch et al. [38]
Trichodelitschia munkii	Kruys 201 (UPS)	DQ384096	DQ384070	-	-	-	Kruys et al. [87]
Tumidispora shoreae	MFLUCC 14-0574	KT314074	KT314076	-	-	-	Ariyawansa et al. [63]
Uwebraunia commune	NC132C1d	-	-	KT216546	-	-	Ismail et al. [88]
Venturia inaequalis	CBS 594.70	GU301879	GU296205	GU357757	KF156040	GU349022	Schoch et al. [38]
Xenolophium applanatum	CBS 123127	GU456330	GU456313	GU456355	-	GU456270	Zhang et al. [89]
Zeloasperisporium hyphopodioides	CBS 218.95	EU035442	-	-	-	-	Crous et al. [90]
Zeloasperisporium siamense	IFRDCC 2194	JQ036228	JQ036223	-	-	-	Mapook et. al. [73]
Zeloasperisporium wrightiae	MFLUCC 15-0225	KT387737	KT387738	-	-	-	Hongsanan et al. [91]

¹ AFTOL-ID: Assembling the Fungal Tree of Life; BCC: BIOTEC Culture Collection; BRIP: Biosecurity Queensland Plant Pathology Herbarium, Brisbane, Australia; CBS: Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands; CCFEE: Culture Collection of Fungi from Extreme Environments, The University of Tuscia; CPC: Culture collection of Pedro Crous, the Netherlands; FMR: Facultad de Medicina, Reus, Tarragona, Spain; GZCC: Guizhou Culture Collection; IFRDCC = International Fungal Research and Development Centre Culture Collection, China; IMI: The International Mycological Institute Culture Collections; JK: J. Kohlmeyer; MFLU: the Herbarium of Mae Fah Luang University; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; MUCL: Belgian Coordinated Collections of Microorganisms; URM: Universidade Federal de Pernambuco. ² LSU: 28S large subunit of the nrRNA gene; SSU: 18S small subunit of the nrRNA gene; RPB2: partial RNA polymerase II second largest subunit gene; ITS: internal transcribed spacer regions 1 and 2 including 5.8S nrRNA gene; TEF1: partial translation elongation factor 1-α gene.