Skip to main content
. Author manuscript; available in PMC: 2020 May 15.
Published in final edited form as: Free Radic Biol Med. 2019 Dec 16;147:139–149. doi: 10.1016/j.freeradbiomed.2019.11.034

Table 1.

Primers used for analysis of mRNA expression using reverse transcriptase (RT) and real-time quantitative PCR. Primers of Nox family were obtained from GeneCopoeia™ (Rockville, MD) and as previously described [28]. Primers of genes mediating EMT were designed with NIH primer blast (https://www.ncbi.nlm.nih. gov/tools/primer-blast) based on genes sequences obtained from the Gen Bank NCBI sequence Viewer.

Gene Forward Primer (5’ to 3’) Reverse Primer (5’ to 3’) Accession Number PCR product size
Nox enzymes
Nox1 GGAGTGGCATCCCTTCACTC GGCATTGGTGAGTGCTGTTG NM_172203.2 127 bp
Nox1 (GeneCopoeia) MQP097901 MQP097901 NM_172203.2 132 bp
Nox2 CGAGTCACGGCCACATACA TGAATGCCAGAGTCGGGATTT FJ168469.1 198 bp
Nox3 CTCGTTGCCTACGGGATAGC CCTTCAGCATCCTTGGCCT NM_198958.2 184 bp
Nox4 MQP078234 MQP078234 NM_001285835 147 bp
Genes mediating EMT
Tgf-P MQP030343 MQP030343 NM_011577.1 125 bp
Slug or snail family zinc finger 2 (Snai2) CTGTATGGACATCGTCGGCA ACTTACACGCCCCAAGGATG NM_011415.3 94 bp
Zinc finger E-box binding homeobox 1 (Zeb1), transcript variant 1 GGTACAGTGGAGGTTGGAGC CTCTCGCTTTCGCTCTCCAT NM_011546.3 85 bp
Zinc finger E-box binding homeobox 2 (Zeb2), transcript variant 2 CATGCCCAACCATGAGTCCT TTCTGGCCCCATTGCATCAT NM_015753.4 177 bp
Twist basic helix-loop-heUx transcription factor 1 (twist1) ATTCAGACCCTCAAACTGGCG TCTTGGAGTCCAGCTCGTCG NM_011658.2 78 bp
Matrix metalloproteinase 2 (MMP-2) TGTACAGACACTGGTCGCAG AAACAAGGCTTCATGGGGGC NM_008610.3 101 bp
Matrix metalloproteinase 9 (MMP-9) CGACTTTTGTGGTCTTCCCCA AGGTTTGGAATCGACCCACG NM_013599.4 254 bp
Snail family zinc finger 1 (Snai1) ACCTCCAAACCCACTCGGAT GACATGCGGGAGAAGGTTCG NM_011427.3 69 bp
Housekeeping gene
18S rRNA GTAACCCGTTGAACCCCATT CCATCCAATCGGTAGTAGCG NR_003278.3 150 bp