Table 1.
Gene | Forward Primer (5’ to 3’) | Reverse Primer (5’ to 3’) | Accession Number | PCR product size |
---|---|---|---|---|
Nox enzymes | ||||
Nox1 | GGAGTGGCATCCCTTCACTC | GGCATTGGTGAGTGCTGTTG | NM_172203.2 | 127 bp |
Nox1 (GeneCopoeia) | MQP097901 | MQP097901 | NM_172203.2 | 132 bp |
Nox2 | CGAGTCACGGCCACATACA | TGAATGCCAGAGTCGGGATTT | FJ168469.1 | 198 bp |
Nox3 | CTCGTTGCCTACGGGATAGC | CCTTCAGCATCCTTGGCCT | NM_198958.2 | 184 bp |
Nox4 | MQP078234 | MQP078234 | NM_001285835 | 147 bp |
Genes mediating EMT | ||||
Tgf-P | MQP030343 | MQP030343 | NM_011577.1 | 125 bp |
Slug or snail family zinc finger 2 (Snai2) | CTGTATGGACATCGTCGGCA | ACTTACACGCCCCAAGGATG | NM_011415.3 | 94 bp |
Zinc finger E-box binding homeobox 1 (Zeb1), transcript variant 1 | GGTACAGTGGAGGTTGGAGC | CTCTCGCTTTCGCTCTCCAT | NM_011546.3 | 85 bp |
Zinc finger E-box binding homeobox 2 (Zeb2), transcript variant 2 | CATGCCCAACCATGAGTCCT | TTCTGGCCCCATTGCATCAT | NM_015753.4 | 177 bp |
Twist basic helix-loop-heUx transcription factor 1 (twist1) | ATTCAGACCCTCAAACTGGCG | TCTTGGAGTCCAGCTCGTCG | NM_011658.2 | 78 bp |
Matrix metalloproteinase 2 (MMP-2) | TGTACAGACACTGGTCGCAG | AAACAAGGCTTCATGGGGGC | NM_008610.3 | 101 bp |
Matrix metalloproteinase 9 (MMP-9) | CGACTTTTGTGGTCTTCCCCA | AGGTTTGGAATCGACCCACG | NM_013599.4 | 254 bp |
Snail family zinc finger 1 (Snai1) | ACCTCCAAACCCACTCGGAT | GACATGCGGGAGAAGGTTCG | NM_011427.3 | 69 bp |
Housekeeping gene | ||||
18S rRNA | GTAACCCGTTGAACCCCATT | CCATCCAATCGGTAGTAGCG | NR_003278.3 | 150 bp |