TABLE 8.
Gene / Variant | Methods | Results | Comment / Conclusion |
---|---|---|---|
BRSK147
BRSK1 (BR serine/threonine kinase 1) is a serine/threonine-protein kinase that plays key role in polarization of neurons and centrosome duplication |
• Single-center pilot study of 176 adult female Caucasian CCS with serum AMH levels as a marker of ovarian reserve • Studied SNPs previously reported associated with age at natural menopause: BRSK1 (rs1172822), ARHGEF7 (rs7333181), MCM8 (rs236114), PCSK1 (rs271924), IGF2R (rs9457827) and TNF (rs909253) |
CT genotype of rs1172822 in BRSK1 gene negatively associated with serum AMH levels (OR 3.15, 95%CI 1.35–7.32, P=0.008) and significantly associated with the predicted age at menopause (P=0.04) Other 5 SNPs not associated with serum AMH levels |
Previously identified SNPs associated with age at menopause in healthy women may have an effect on onset of menopause in female CCS. |
NPY2R48
NPYR2 (Neuropeptide Receptor 2 gene) belongs to a family of G-protein coupled receptors activated by a group of closely related peptide hormones. These neuropeptide Y receptors control diverse behavioral processes including appetite, circadian rhythm and anxiety. Activated neuropeptide receptors release G1 subunit from the heterotrimeric G protein complex and this in turn inhibits production of the second messenger cAMP |
• GWAS of 779 female CCSs to identify SNPs associated with clinically diagnosed PM (defined as menopause <40 years) Analyses adjusted for cyclophosphamide equivalent dose of alkylating agents and ovarian RT dose • Replication using self-reported PM in 1624 survivors p in the Childhood Cancer Survivor Study (CCSS) |
• PM clinically diagnosed in 30 (3.8%) participants • 13 SNPs upstream of NPY2R associated with prevalence of PM (minimum P=3.3 × 10–7 for rs9999820, all P< 10–5) • Homozygous carrier of a haplotype formed by 4/13 SNPs associated with markedly elevated PM prevalence if exposed to ovarian RT (OR 25.89, 95%CI 6.18–138.31, P=8.2 × 10–6); replicated in the independent second cohort |
• NPY2R haplotype captures majority of clinically diagnosed PM cases • Evidence from bioinformatics suggests the haplotype alters regulation of NPY2R transcription, possibly affecting PM risk through neuroendocrine pathways |
ERα and ERβ49 | • 51 SNP markers of 12 different haplotype blocks in the AR, ERα and ERβ genes examined in 127 CCS | • Markers of one specific haplotype block of ERα (rs2207396, rs9340958, rs9340978) associated with increased risk of azoospermia • Compared with GG genotype, patients heterozygous for A allele in rs2207396 had significantly increased risk of azoospermia [OR 3.8; 95%CI: 1.5–9.5; P=0.008], and even higher if treated with alkylating agents (OR 8.8; 95%CI 2.1–36; P=0.004) |
• Genetic markers of high risk of post-treatment azoospermia may help identify boys to whom preservation of testicular tissue before cancer therapy should be offered |
95%CI, 95% confidence interval; AR, androgen receptor; CCSs, childhood cancer survivors; ER, estrogen receptor; GWAS, Genome-wide association study; OR, odds ratio; PM, premature menopause; RT, radiation therapy; SNPs, single-nucleotide polymorphisms