Skip to main content
. 2020 May 8;11:539. doi: 10.3389/fpls.2020.00539

TABLE 3B.

Variance components and percentage within-environment variance for random effects in the models with SJ data.

Trait Model Estimated variance components Percentage of within-environment variancer


E L G GxE A AxE R L G GxE A AxE R
Protein ELG 1.02 0.05 0.06 0.15 17.78 21.88 60.33
ELG-GxE 1.00 0.04 0.05 0.03 0.14 15.14 19.37 11.30 54.19
ELA 0.96 0.05 0.07 0.16 18.24 25.90 55.87
ELA-AxE 0.94 0.05 0.07 0.03 0.15 15.99 22.72 10.30 50.99
ELGA 0.95 0.04 0.04 0.05 0.15 13.12 15.20 16.51 55.17
ELGA-GxE-AxE 0.94 0.03 0.04 0.02 0.04 0.02 0.13 10.32 12.96 8.18 13.62 7.87 47.05
SSW ELG 11.40 0.93 1.40 4.17 14.32 21.54 64.14
ELG-GxE 10.60 0.82 1.33 0.51 4.06 12.21 19.80 7.56 60.43
ELA 11.10 1.05 1.76 4.32 14.73 24.68 60.59
ELA-AxE 10.20 0.97 1.64 0.49 4.24 13.21 22.34 6.70 57.75
ELGA 10.50 0.72 1.01 1.00 4.10 10.60 14.78 14.62 60.00
ELGA-GxE-AxE 10.90 0.62 0.93 0.41 0.92 0.38 3.95 8.58 12.89 5.68 12.78 5.31 54.75
SF_abv2.5 ELG 118.00 15.70 28.20 37.40 19.31 34.69 46.00
ELG-GxE 108.00 13.80 26.80 6.88 34.60 16.81 32.65 8.38 42.15
ELA 116.00 14.60 42.00 37.70 15.48 44.54 39.98
ELA-AxE 95.40 12.80 39.40 7.13 34.80 13.60 41.86 7.57 36.97
ELGA 121.00 9.80 17.80 19.20 36.20 11.81 21.45 23.13 43.61
ELGA-GxE-AxE 92.70 7.93 16.40 5.12 16.80 5.56 32.10 9.45 19.54 6.10 20.02 6.63 38.26
SF_abv2.2 ELG 5.04 0.94 1.40 3.24 16.88 25.08 58.04
ELG-GxE 4.46 0.78 1.37 0.45 3.06 13.82 24.18 7.98 54.02
ELA 5.11 0.85 2.15 3.23 13.62 34.52 51.86
ELA-AxE 4.48 0.73 1.89 0.49 3.04 11.79 30.75 8.00 49.46
ELGA 4.62 0.61 0.83 1.19 3.14 10.51 14.39 20.64 54.46
ELGA-GxE-AxE 4.10 0.47 0.78 0.32 0.95 0.39 2.88 8.05 13.44 5.51 16.38 6.75 49.87

E environment, L line, G genomic (marker), A pedigree information, GxE genomic by environment interaction, AxE pedigree × environment interaction, and R model residual. rRelative to the total variance minus the variance due to environment main effect.