TABLE 1.
Summary of de novo transcriptome assembly of Menispermum canadense and M. dauricum.
Categories | Features | M. canadense | M. dauricum |
Raw reads | Total raw reads (M) | 57.15 | 53.79 |
Total clean reads (M) | 44.60 | 45.22 | |
Total Clean bases (Gb) | 6.69 | 6.78 | |
Clean reads Q20 (%) | 97.09 | 98.09 | |
Clean reads Q30 (%) | 92.15 | 94.83 | |
Transcripts | Total number of transcripts | 86,883 | 104,064 |
Total length of transcripts (bp) | 69,428,938 | 98,356,172 | |
Mean length of transcripts (bp) | 799 | 945 | |
N50 value of transcripts | 1,431 | 1,528 | |
GC (%) | 42.59 | 46.36 | |
Unigenes | Total number of unigenes | 53,712 | 78,921 |
Total length of unigenes (bp) | 49,461,581 | 77,153,863 | |
Mean length unigenes (bp) | 920 | 978 | |
N50 value of unigenes | 1,519 | 1,583 | |
GC (%) | 42.50 | 45.18 |