Table 3.

Average methylation level of whole genome and every chromosome.

Sample	Chromosome	mC (%)	mCG (%)	mCHG (%)	mCHH (%)
CK	Whole Genome	9.95 ± 0.21	33.03 ± 0.33	20.63 ± 0.24	2.86 ± 0.13
	fakechr1	8.70 ± 0.22	28.74 ± 0.46	17.43 ± 0.29	2.50 ± 0.11
	fakechr2	10.72 ± 0.23	35.99 ± 0.35	23.10 ± 0.25	3.08 ± 0.14
	fakechr3	10.30 ± 0.21	35.09 ± 0.31	20.96 ± 0.23	2.98 ± 0.14
	fakechr4	9.34 ± 0.20	31.32 ± 0.31	19.42 ± 0.21	2.75 ± 0.12
	fakechr5	11.01 ± 0.22	34.59 ± 0.34	23.21 ± 0.25	3.05 ± 0.15
	fakechr6	9.96 ± 0.19	33.84 ± 0.21	20.58 ± 0.19	2.92 ± 0.13
	fakechr7	9.19 ± 0.19	31.16 ± 0.21	18.50 ± 0.22	2.57 ± 0.12
DS	Whole Genome	10.81 ± 0.26*	33.82 ± 0.65	21.95 ± 0.32**	3.25 ± 0.29
	fakechr1	9.35 ± 0.23*	29.11 ± 0.83	18.44 ± 0.37**	2.81 ± 0.24
	fakechr2	11.67 ± 0.29*	36.85 ± 0.69	24.69 ± 0.36**	3.51 ± 0.32
	fakechr3	11.28 ± 0.28*	36.32 ± 0.57*	22.49 ± 0.33**	3.40 ± 0.30
	fakechr4	10.30 ± 0.24*	32.45 ± 0.45*	21.07 ± 0.26**	3.18 ± 0.28
	fakechr5	11.73 ± 0.29*	34.94 ± 0.99	23.79 ± 0.43	3.43 ± 0.32
	fakechr6	10.91 ± 0.26*	34.72 ± 0.34*	22.32 ± 0.21**	3.34 ± 0.30
	fakechr7	10.02 ± 0.26	32.01 ± 0.01	19.87 ± 0.18**	2.92 ± 0.27

Note: The asterisk behind the results indicate the significant difference of the changes between CK and DS samples with the level of P > 0.05 (shown as nothing), 0.01 < P ≤ 0.05 (shown as *) and P ≤ 0.01 (shown as **). The same as below.