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. 2020 Apr 9;18(4):199. doi: 10.3390/md18040199

Table 4.

Genome mining approaches applied to ants, copepods and plants.

Organism Experimental Purpose Associated Techniques References
Atta cephalotes, Camponotus floridanus and Harpegnathos saltator Defense- and neuropeptides in Social Ants tBLASTn, GeneWise algorithm, ClustalW [4]
Calanus sp., Pontella sp., Oikopleura sp., Acartia sp., Acartia sp. and Corycaeus sp. Metabolic pathway from conversion from β-carotene to astaxanthin. LC-UV method, HPLC, Hhpred database [79]
Arabidopsis thaliana, Capsella rubella, Brassica oleracea, Nicotiana benthamiana, Agrobacterium tumefaciens Sesterterpene biosynthetic gene cluster plantiSMASH, heteroloug expression, GC-MS, cristallography [80]