Table 3.
Under-represented palindromic tetramers in HF1-group virus genomes.
| Under-represented Tetramers 1 | |||||
|---|---|---|---|---|---|
| Virus/provirus | CTAG | GATC | AGCT | TGCA | CATG |
| HF1 | 0 | 0 | . | 0.19 | 0.42 |
| HF2 | 0 | 0 | . | 0.19 | 0.42 |
| Serpecor1 | 0 | 0 | . | 0.34 | 0.44 |
| Hardycor2 | 0 | 0 | . | 0.19 | 0.44 |
| HRTV-5 | 0 | 0 | . | 0.27 | 0.35 |
| HRTV8 | 0 | 0 | . | 0.45 | 0.37 |
| HRTV-7 | 0 | 0 | 0 | 0.32 | 0.36 |
| ELPmg-prov1 | 0 | 0.45 | . | 0.58 | 0.39 |
| Hdep-prov1 | 0.02 | 0.45 | . | 0.70 | 0.24 |
1 under-representation calculated as Odds Markov values where they are not zero. Dots indicate normal or near-normal frequencies.