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. 2020 May 18;41(3):314–327. doi: 10.24272/j.issn.2095-8137.2020.035

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Editorial Office of Zoological Research, Kunming Institute of Zoology, Chinese Academy of Sciences

This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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A: PCA clustering of full transcriptional profiles of L. crocea. B: PCA clustering of full transcriptional profiles of P. plecoglossicida. C: Validation of RNA-seq data by qRT-PCR. Blue indicates host, orange indicates pathogen, and R-square is marked. D: Hierarchical clustering of major classes of differentially expressed mRNAs (DEMs, P<0.01, log₂ fold-change (Log₂FC)≥2) in L. crocea transcriptomes. E: Hierarchical clustering of major classes of DEMs (P<0.01, log₂ fold-change (Log₂FC)≥2) in P. plecoglossicida transcriptomes. Relative expression levels of each transcript (rows) in each sample (column) are shown. FPKM was log₂-transformed and then median-centered by transcript. CG: Control group; WT1d: Infected group sampled at 1 dpi; WT2d: Infected group sampled at 2 dpi, and so on. Same below.