Table 2.
Thermodynamics of dsDNA melting in the presence and absence of Mre11ND
Rpa | Tm (°C)b | ΔH (kJ moi−1)b | ΔS (kJ mol−1 K−1)c | ΔG (kJ moi−1)d | ΔΔGe | ΔΔGf | |
---|---|---|---|---|---|---|---|
apo | 0.995 | 52.4 ± 0.7 | −98.1 ± 6.2 | −0.36 ± 0.03 | 18.1 | ||
WT | 0.998 | 58.7 ± 0.4 | −117.7 ± 5.3 | −0.43 ± 0.03 | 21.8 | −3.7 | |
Y187C | 0.998 | 57.5 ± 0.4 | −103.8 ± 4.4 | −0.38 ± 0.02 | 19.2 | −1.1 | 2.6 |
H52S | 0.993 | 54.9 ± 0.9 | −106.3 ± 9.0 | −0.39 ± 0.05 | 19.7 | −1.5 | 2.1 |
Y187F | 0.997 | 59.2 ± 0.7 | −117.7 ± 6.6 | −0.43 ± 0.03 | 21.9 | −3.7 | 0.0 |
Pearson correlation coefficient
Errors are from the covariance of the fits.
Calculated with Eq. 5 of Petruska and Goodman [41]. Errors propagated from ΔH.
Calculated with ΔG = ΔH – TΔS at 50 °C, which is the temperature used for NMR experiments.
ΔGMre11ND, bound - ΔGapo
ΔGwt - ΔGmutant