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. Author manuscript; available in PMC: 2020 Aug 1.
Published in final edited form as: Stat Methods Med Res. 2019 Nov 18;29(8):2179–2197. doi: 10.1177/0962280219885985

Table 1.

Metabolits identified with a latent class based on p value less than 0.001 for at least one of the Wald test, LR test and Score test.

Metabolites Super-pathway Est. of Prob. (latent class) P value
Wald LR Score
Y_100003260 Amino Acid 0.105 5.77 × 10−12 1.65 × 10−8 2.17 × 10−6
Y_35 Amino Acid 0.021 1.75 × 10−3 3.09 × 10−4 6.69 × 10−3
Y_241 Amino Acid 0.058 8.64 × 10−10 5.85 × 10−10 1.48 × 10−7
Y_100002185 Amino Acid 0.227 0.00 × 100 4.06 × 10−11 5.56 × 10−9
Y_1094 Amino Acid 0.024 1.22 × 10−2 5.77 × 10−7 7.10 × 10−2
Y_100015735 Lipid 0.189 0.00 × 100 0.00 × 100 0.00 × 100
Y_273 Lipid 0.020 5.02 × 10−7 0.00 × 100 1.15 × 10−7
Y_100019957 Lipid 0.162 6.68 × 10−11 7.13 × 10−7 3.83 × 10−5
Y_100015833 Lipid 0.074 6.88 × 10−5 4.60 × 10−4 3.24 × 10−3
Y_100019958 Lipid 0.136 1.54 × 10−8 3.96 × 10−6 1.16 × 10−4
Y_100008934 Lipid 0.074 0.00 × 100 0.00 × 100 0.00 × 100
Y_100005716 Lipid 0.172 2.56 × 10−10 1.11 × 10−5 1.07 × 10−4
Y_100008921 Lipid 0.042 1.30 × 10−2 2.10 × 10−4 1.28 × 10−2
Y_100009154 Lipid 0.254 0.00 × 100 0.00 × 100 1.00 × 10−15
Y_100009345 Lipid 0.035 2.47 × 10−5 2.06 × 10−5 8.51 × 10−5
Y_100015666 Lipid 0.033 1.74 × 10−4 2.05 × 10−4 9.28 × 10−4
Y_100015609 Lipid 0.104 0.00 × 100 0.00 × 100 0.00 × 100
Y_100015731 Lipid 0.271 0.00 × 100 1.34 × 10−9 2.55 × 10−8
Y_100015792 Lipid 0.022 1.06 × 10−3 6.95 × 10−4 2.14 × 10−3
Y_207 Nucleotide 0.282 0.00 × 100 5.27 × 10−8 4.71 × 10−7
X_17335 Unknown 0.424 0.00 × 100 0.00 × 100 0.00 × 100
X_21788 Unknown 0.140 1.54 × 10−7 2.64 × 10−5 6.28 × 10−5
X_21796 Unknown 0.064 6.14 × 10−11 3.86 × 10−12 2.51 × 10−6
X_22776 Unknown 0.215 1.18 × 10−6 1.30 × 10−3 9.30 × 10−3
X_23294 Unknown 0.417 0.00 × 100 1.10 × 10−14 0.00 × 100
X_23637 Unknown 0.010 3.76 × 10−3 5.41 × 10−4 5.95 × 10−3
X_24832 Unknown 0.022 5.63 × 10−5 3.50 × 10−7 1.51 × 10−3
Y_100004601 Xenobiotics 0.398 0.00 × 100 0.00 × 100 0.00 × 100
Y_100001623 Xenobiotics 0.056 0.00 × 100 0.00 × 100 0.00 × 100
Y_100003696 Xenobiotics 0.167 6.43 × 10−11 2.45 × 10−7 1.04 × 10−4
Y_100002324 Xenobiotics 0.117 1.40 × 10−14 1.51 × 10−9 1.42 × 10−8