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. 2020 May 18;182(1):73–84.e16. doi: 10.1016/j.cell.2020.05.025

Table 1.

Summary of the 10X scRNA and scVDJ Sequencing of Antigen-Binding B Cells

Enrichment Antigen PBMC Status VJ Paired Cells Naive B Cells Memory B Cells Exhausted B Cells Non-B Cells IgG1 Clonotypes
Batch 1 S protein fresh 14,895 5,417 6,333 1,680 1,465 2,598
Batch 2 S protein frozen 6,962 1,051 1,161 362 4,388 883
Batch 3 RBD protein fresh 6,000 1,668 2,603 498 1,231 812
Batch 4 S1 (RBD-) fresh 11,536 3,202 6,413 1,710 211 3,093
Batch 5 RBD protein fresh 8,020 3,532 3,302 823 363 916
Batch 6 RBD protein fresh 2,925 1,177 1,353 260 135 256
Total 50,338 16,047 21,165 5,333 7,793 8,558

The experimental details for each sequencing batch. Enrichment antigen refers to the antigen used for the MACS pull-down. Batch 4 was performed on samples that have RBD-binding B cells filtered. PBMC status refers to whether the PBMC used were previously frozen. VJ paired cells refer to cells that both full-length heavy- and light-chain variable regions were detected. Cells are assigned to the same clonotype if they have identical heavy- and light-chain CDR3 DNA sequences. See also Figure S2.