Table 2.
List of predicted epitopes based on NetMHCII 3.2 server and VaxiJen score (threshold value of 0.7 and above was selected)
| Protein ID | Allele (HLA) |
POS | Peptide | 1-log50k(aff) | VaxiJen | Antigen/non antigen |
|---|---|---|---|---|---|---|
| Q76L83 | DRB1_0101 | 328 | IRYLAALHL | 0.581 | 0.9461 | Antigen |
| DRB1_0103 | 328 | IRYLAALHL | 0.311 | 0.9461 | Antigen | |
| DRB1_0301 | 801 | LSAEERLLR | 0.271 | 0.2947 | Non antigen | |
| DRB1_0401 | 225 | FLRAIGMTD | 0.292 | − 0.3463 | Non antigen | |
| DRB1_0404 | 328 | IRYLAALHL | 0.375 | 0.9461 | Antigen | |
| DRB1_0405 | 328 | IRYLAALHL | 0.336 | 0.9461 | Antigen | |
| DRB1_0406 | 328 | IRYLAALHL | 0.255 | 0.9461 | Antigen | |
| DRB1_0701 | 328 | IRYLAALHL | 0.496 | 0.9461 | Antigen | |
| DRB1_0802 | 324 | IIATIRYLA | 0.284 | − 0.5053 | Non antigen | |
| DRB1_1101 | 1010 | YMYVLKLHH | 0.451 | 1.2693 | Antigen | |
| DRB1_1302 | 154 | FVINGTERV | 0.445 | − 0.7514 | Non antigen | |
| Q96P47 | DRB1_0101 | 84 | YTILASRDV | 0.410 | 0.2401 | Non antigen |
| DRB1_0406 | 86 | ILASRDVLA | 0.200 | − 0.1277 | Non antigen | |
| P00846 | DRB1_0101 | 222 | FFSLTGLRQ | 0.478 | − 0.0649 | Non antigen |
| DRB1_0103 | 244 | YMKFGVAAL | 0.194 | 0.3077 | Non antigen | |
| DRB1_0301 | 152 | GLLDKVMIR | 0.249 | 0.6173 | Non antigen | |
| DRB1_0401 | 198 | MFALDSIPA | 0.343 | 0.4086 | Non antigen | |
| DRB1_0404 | 295 | IIALSVALS | 0.339 | 0.8054 | Antigen | |
| DRB1_0405 | 222 | FFSLTGLRQ | 0.350 | − 0.0649 | Non antigen | |
| DRB1_0406 | 295 | IIALSVALS | 0.237 | 0.8054 | Antigen | |
| DRB1_0701 | 87 | FRFAVPEIF | 0.420 | 1.2093 | Antigen | |
| DRB1_0802 | 18 | MLVTVRRPA | 0.314 | − 0.5928 | Non antigen | |
| DRB1_0901 | 87 | FRFAVPEIF | 0.407 | 1.2093 | Antigen | |
| DRB1_0901 | 244 | YMKFGVAAL | 0.386 | 0.3077 | Non antigen | |
| DRB1_1001 | 222 | FFSLTGLRQ | 0.477 | − 0.0649 | Non antigen | |
| DRB1_1101 | 18 | MLVTVRRPA | 0.402 | − 0.5928 | Non antigen | |
| DRB1_1302 | 159 | IRMNVSKNY | 0.420 | 0.7822 | Antigen | |
| DRB1_1602 | 222 | FFSLTGLRQ | 0.335 | − 0.0649 | Non antigen | |
| O14569 | DRB1_0101 | 175 | FYALQAGQA | 0.539 | 0.6085 | Non antigen |
| DRB1_0301 | 278 | LAFELRRKR | 0.220 | 0.7910 | Antigen | |
| DRB1_0401 | 175 | FYALQAGQA | 0.284 | 0.6085 | Non antigen | |
| DRB1_0404 | 8 | FLQNILLPI | 0.299 | 0.1551 | Non antigen | |
| DRB1_0405 | 8 | FLQNILLPI | 0.341 | 0.1551 | Non antigen | |
| DRB1_1001 | 175 | FYALQAGQA | 0.467 | 0.6085 | Non antigen | |
| DRB1_1101 | 63 | FLKQIRAQR | 0.438 | − 0.0522 | Non antigen | |
| DRB1_1302 | 8 | FLQNILLPI | 0.478 | 0.1551 | Non antigen | |
| Q7XBS0 | DRB1_0101 | 374 | YILQKAFYA | 0.556 | 0.3071 | Non antigen |
| DRB1_0103 | 374 | YILQKAFYA | 0.274 | 0.3071 | Non antigen | |
| DRB1_0401 | 374 | YILQKAFYA | 0.323 | 0.3071 | Non antigen | |
| DRB1_0404 | 334 | VLMVSAFPL | 0.350 | 1.2114 | Antigen | |
| DRB1_0405 | 374 | YILQKAFYA | 0.312 | 0.3071 | Non antigen | |
| DRB1_0406 | 334 | VLMVSAFPL | 0.250 | 1.2114 | Antigen | |
| DRB1_0701 | 334 | VLMVSAFPL | 0.539 | 1.2114 | Antigen | |
| DRB1_0802 | 435 | FLAIRVKLG | 0.274 | 1.1141 | Antigen | |
| DRB1_0901 | 334 | VLMVSAFPL | 0.436 | 1.2114 | Antigen | |
| DRB1_1001 | 374 | YILQKAFYA | 0.473 | 0.3071 | Non antigen | |
| DRB1_1101 | 503 | YFLVITRCR | 0.416 | − 0.2632 | Non antigen | |
| DRB1_1302 | 334 | VLMVSAFPL | 0.412 | 1.2114 | Antigen | |
| DRB1_1602 | 374 | VLMVSAFPL | 0.366 | 0.3071 | Non antigen |