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. 2020 May 12;11(19):1777–1796. doi: 10.18632/oncotarget.27590

Table 4. Mouse genes differentially regulated in B16F10L tumors from A-I KO and A-I Tg+/– mice and concordant with human genes associated with poor outcome in melanoma were mapped to top functions in IPA.

Expression in A-I KO relative to A-I Tg mice Gene Symbol Top Functions
Atad2, Birc5, Cdca8, Cdk1, Cenpa, Dtymk, Htra2, Kif2c, Mcmr, Mcm6, Melk, Nasp, Ndc80, Psmc3ip, Ran, Ranbp1, Rrm2, Srp19, Timeless, Tyms DNA Replication, Recombination and Repair, Cellular Assembly and Organization, Nucleic Acid Metabolism
F10, Hla-dqb1
Anln, Atad2, Cdc45, Cdc14b, Gpn3, Kpna2, Mrps16, Mrps17, Nans, Ncapg2, Ncaph, Rfc4, Shcbp1, Tyms Cell Cycle, DNA Replication, Recombination and Repair, Cellular Assembly and Organization
Kdelr2, Loc100505793/Fusip1, Ncp1, Ncoa6, Ola1, Prim2, Rbmx, Rfc5, Srp19, Surf4, Tars, Trub2 Cell Cycle, Cancer, Infection Mechanism
Cdca5, Gemin6, Hspd1, Nme1, Rfc4, Rfc5, Snrpg, Tcof1, Tk1, Top2a Cell Cycle, DNA Replication, Recombination and Repair, Developmental Disorder

Genes whose expression in A-I KO relative to A-I Tg+/– were determined to be concordant with a subset of genes previously identified in a human study [8] to track with poor outcome in melanoma (Table 3), were mapped to top functions in Ingenuity Pathway Analysis (IPA) and are shown in Table 4. Arrows indicate the direction of expression of these genes in day 7 B16F10L tumors from A-I KO relative to A-I Tg+/– animals.