Table 3. Respiratory Molecular Panels: Organisms and Resistance Genes Sought^a.

manufacturer	Curetis Unyvero			BioFire FilmArray		Nanosphere	Hologic	Seegene
panel	P50	P55	lower respiratory tract (pneumonia)	“respiratory”	“pneumonia”	Verigene RV+	Gen-Probe Prodesse assays	respiratory panel
sample type	sputum, BAL	sputum, BAL	tracheal aspirate	naso-pharyngeal swab (NPS)	BAL, sputum, tracheal aspirate	NPS	NPS	NPS, NP aspirate, BAL, sputum
Viruses
adenovirus				×	×		×	×
coronavirus				×	×			×
human metapneumovirus				×	×		×	×
human rhinovirus/enterovirus				×	×			×
influenza A				×	×	×	×	×
influenza B				×	×	×	×	×
parainfluenza virus				×	×		×	×
respiratory syncytial virus				×	×	×	×	×
human bocavirus								×
MERS Co-V					×b
Bacteria
Acinetobacter calcoaceticus-baumannii complex	×	×	×		×
Stenotrophomonas maltophilia	×	×	×
Enterobacter cloacae complex		×	×		×
Enterobacter spp.	×
Escherichia coli	×	×	×		×
H. influenzae	×	×	×		×			×
Klebsiella aerogenes		×			×
Klebsiella oxytoca	×	×	×		×
K. pneumoniae	×	×	×		×
Klebsiella variicola		×	×
Moraxella catarrhalis					×
Proteus spp.	×	×	×		×
Morganella morganii	×	×	×
Citrobacter freundii		×	×
Moraxella catarrhalis	×	×	×
P. aeruginosa	×	×	×		×
Serratia marcescens	×	×	×		×
S. aureus	×	×	×		×
Streptococcus agalactiae					×
S. pneumoniae		×	×		×			×
Streptococcus pyogenes					×
Streptococcus mitis group	×
C. pneumoniae	×	×	×	×	×			×
L. pneumophila	×	×	×		×			×
M. pneumoniae		×	×	×	×			×
Bordetella parapertussis				×				×
Bordetella pertussis				×				×
Fungi
Pneumocystis jirovecii	×	×	×
Resistance Genes
ermA	×
ermB	×	×
ermC	×
msrA	×
mefA/E	×
mecA	×	×	×		×
mecC		×			×
blaTEM	×	×	×
blaSHV	×	×
blaCTX-M	×	×	×		×
blaEBC	×
blaDHA	×
blaKPC	×	×	×		×
blaIMP		×			×
blaNDM		×	×		×
blaVIM		×	×		×
blaOXA-23		×	×
blaOXA24/40		×	×
blaOXA-48		×	×		×
blaOXA-58		×	×
blaOXA 51 like	×
int1	×
sul1	×	×
gyrA83	×	×
gyrA87	×	×
parC	×

^aThis table include the major tests which seek bacteria and viruses; other more specific tests are available, but are excluded.

^bOnly on the Pneumonia Plus Panel.