Table 2.
Annotation of the candidate genes related to the five SNPs associated with husk traits.
| Candidate genes | Traita | Chr | Gene interval(bp) | Distance from the related SNP to the edge of the gene (bp)b | Annotation |
|---|---|---|---|---|---|
| GRMZM2G003984 | HN | 1 | 48953687–48999879 | +30602 | Lon protease |
| GRMZM2G012416 | HN | 4 | 204054112–204064316 | −29974 | ARM repeat superfamily protein |
| AC212835.3_FG007 | HT | 2 | 21007540–21010895 | Located | Poly(U)-specific endoribonuclease-B |
| GRMZM2G057159 | HT | 2 | 221366850–221371447 | +5120 | Subtilase family protein |
| GRMZM2G381691 | HT | 10 | 94248710–94251264 | −52369 | CCT domain protein |
aHusk layer Number (HN) and Husk Thickness (HT).
bThe positive (+) and negative (−) values represent related SNPs location in the 5′ and 3′ direction, respectively, of their candidate gene.