Table 3. A comparison of eight features performance in the training data.
| % | ACC | MCC | SN | SP | Precision | Recall |
|---|---|---|---|---|---|---|
| 1 GO | 82.18 | 64.39 | 83.29 | 81.08 | 81.52 | 83.29 |
| 2 Pfam | 87.35 | 75.01 | 82.88 | 91.83 | 91.03 | 82.88 |
| 3 Smart | 72.62 | 50.45 | 50.49 | 94.75 | 90.59 | 50.49 |
| 4 PROSITE | 78.69 | 60.24 | 63.50 | 93.89 | 91.23 | 63.50 |
| 5 SUPFAM | 75.01 | 52.30 | 60.43 | 89.59 | 85.34 | 60.43 |
| 6 InterPro | 88.42 | 76.91 | 86.25 | 90.59 | 90.16 | 86.25 |
| 7 PRINTS | 70.07 | 49.06 | 41.31 | 98.83 | 97.24 | 41.31 |
| 8 SL | 79.64 | 59.49 | 76.00 | 83.28 | 82.02 | 76.00 |
| 9 PSSM | 86.19 | 72.40 | 87.34 | 85.04 | 85.37 | 87.34 |
| Feature(1-8) | 89.74 | 79.53 | 87.85 | 91.63 | 91.30 | 87.85 |
| Feature(1-9) | 90.13 | 80.34 | 87.99 | 92.28 | 91.93 | 87.99 |
Note: The abbreviations in the table are: Accuracy (ACC), Matthews Correlation Coefficient (MCC),
Sensitivity (SN) and Specificity (SP). “Feature(1-8)” indicates that the first 8 features were applied, and “Feature(1-9)” means that all features were applied.