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. 2020 May 19;9:e55167. doi: 10.7554/eLife.55167

Table 2. Table of study sets currently included in the SpikeForest analysis.

Study sets fall into three categories: paired, synthetic, and curated. Each study set comprises one or more studies, which in turn comprise multiple recordings acquired or generated under the same conditions.

Study set # Rec. / # Elec. / Dur. Source lab. Description
Paired intra/extracellular
PAIRED_BOYDEN 19 / 32ch / 6-10min E. Boyden Subselected from 64, 128, or 256-ch. probes, mouse cortex
PAIRED_CRCNS_HC1 93 / 4-6ch / 6-12min G. Buzsaki Tetrodes or silicon probe (one shank) in rat hippocampus
PAIRED_ENGLISH 29 / 4-32ch / 1-36min D. English Hybrid juxtacellular-Si probe, behaving mouse, various regions
PAIRED_KAMPFF 15 / 32ch / 9-20min A. Kampff Subselected from 374, 127, or 32-ch. probes, mouse cortex
PAIRED_MEA64C_YGER 18 / 64ch / 5min O. Marre Subselected from 252-ch. MEA, mouse retina
PAIRED_MONOTRODE 100 / 1ch / 5-20min Boyden, Kampff, Marre, Buzsaki Subselected from paired recordings from four labs
Simulation
SYNTH_BIONET 36 / 60ch / 15min AIBS BioNet simulation containing no drift, monotonic drift, and random jumps; used by JRCLUST, IronClust
SYNTH_JANELIA 60 / 4-64ch / 5-20min M. Pachitariu Distributed with KiloSort2, with and without simulated drift
SYNTH_MAGLAND 80 / 8ch / 10min Flatiron Inst. Synthetic waveforms, Gaussian noise, varying SNR, channel count and unit count
SYNTH_MEAREC_NEURONEX 60 / 32ch / 10min A. Buccino Simulated using MEAREC, varying SNR and unit count
SYNTH_MEAREC_TETRODE 40 / 4ch / 10min A. Buccino Simulated using MEAREC, varying SNR and unit count
SYNTH_MONOTRODE 111 / 1ch / 10min Q. Quiroga Simulated by Quiroga lab by mixing averaged real spike waveforms
SYNTH_VISAPY 6 / 30ch / 5min G. Einevoll Generated using VISAPy simulator
Human curated
MANUAL_FRANKLAB 21 / 4ch / 10-40min L. Frank Three manual curations of the same recordings