Table 1.
Our model (HSIC Lasso + SVM/KR) | HSIC Lasso | Lasso | SVM/KR | Random forest | Partial least squares | Sparse partial least squares | Multiple linear/logistic regression | |
---|---|---|---|---|---|---|---|---|
Prediction | Performed | Not performed | Performed | Performed | Performed | Performed | Performed | Performed |
Feature selection | Performed | Performed | Performed | Not performed | Not performed | Not performed | Performed | Not performed |
Nonlinear association between variables | Detectable | Detectable | Not detectable | Detectable | Detectable | Not detectable | Not detectable | Not detectable |
Notes: Preferable properties for handling metabolomic data are in bold.
HSIC Lasso Hilbert–Schmidt Independence Criterion Lasso, SVM support vector machine, KR kernel regression.