Table 1.
The data analyzed for low coverage genome skims. The table lists the number of specimens sampled and analyzed overall (All) and for the two projects, PhyloAlp (including PhyloCarpates) and PhyloNorway. The three last columns list the number of specimens in the species-rich families that contain at least 20 taxa across the studied region. Number of complete genomes, average cover, and average library insert size (base pairs) is also given.
| All | PhyloAlps + Carp | Phylo Norway | All (+ 20 fam) | PhyloAlps + Carp (+ 20 fam) | PhyloNorway (+ 20 fam) | |
|---|---|---|---|---|---|---|
| Specimens | 6655 | 4604 | 2051 | 5893 | 4057 | 1836 |
| Libraries | 6817 | 4726 | 2091 | 6018 | 4147 | 1871 |
| Families | 161 | 158 | 112 | 43 | 43 | 43 |
| Genera | 1037 | 922 | 576 | 804 | 705 | 461 |
| Taxa | 5575 | 4437 | 1899 | 4957 | 3914 | 1689 |
| Complete genome cpDNA | 4439 | 3303 | 1136 | 3944 | 2922 | 1022 |
| Average sequencing depth cpDNA | 278 | 318 | 187 | 265 | 300 | 188 |
| Complete nrDNA cluster | 5748 | 4021 | 1727 | 5092 | 3543 | 1549 |
| Average sequencing depth nrDNA | 603 | 674 | 444 | 579 | 638 | 450 |
| Average library insert size | 316 | 346 | 249 | 318 | 350 | 249 |