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. 2020 May 21;27(6):668–677.e9. doi: 10.1016/j.chembiol.2020.05.002
REAGENTS OR RESOURCES SOURCE IDENTIFIER
Bacterial and Virus Strains

E. coli BL21(DE3) Thermo Scientific Cat#EC0014
pDENV-Luc infectious clone Marceau et al. (2016) N/A
pDENV-Luc replicon Marceau et al. (2016) N/A

Chemicals, Peptides and Recombinant Proteins

DMEM Gibco Cat#11995065
Trypsin/EDTA Gibco Cat#25300054
Penicillin-Streptomycin Gibco Cat#15140122
Glutamine Gibco Cat#25030081
Fetal Bovine Serum HyClone Cat#SH30396.03
Electroporation Buffer for replicon Teknova Cat#E0399
XbaI Restriction Enzyme New England BioLabs Cat#R0145S
Lactate dehydrogenase, porcine heart (LDH) EMD Millipore Cat#427211
Pyruvate kinase, rabbit muscle type III (PK) Sigma-Aldrich Cat#P9136
Adenosine triphosphate disodium trihydrate (ATP) VMR Life Science Cat#0220
β-Nicotinamide adenine dinucleotide, reduced disodium salt hydrate (NADH) Santa Cruz Cat# sc-205762A
Phosphoenolpyruvate monopotassium salt (PEP) Sigma-Aldrich Cat#P7127
Cytidine 5’-monophospahte disodium salt (CMP) Sigma-Aldrich Cat#C1006
Uridine Sigma-Aldrich Cat#U3750
LB Broth Fisher BioReagents Cat#BP97235
Isopropyl-1-thio-b-D-galacto-pyranoside (IPTG) Thermo Fisher Scientific Cat#R0392
R1479 MedChemExpress Cat#HY-10444
Dipyridamole (DPY) MP Biomedicals Cat#0215372205
D-ribose Chem Impex Cat#50494709
Tetrabutylammonium fluoride solution (TBAF), 1.0M Sigma-Aldrich Cat#216143
Diethyl azodicarboxylate solution (DEAD), 40 wt.% Sigma-Aldrich Cat#563110
Triphenylphosphine (PPh3) Sigma-Aldrich Cat#T84409
Uracil Sigma-Aldrich Cat#U0750
5-Fluorouracil Sigma-Aldrich Cat#F6627
Thymine AK Scientific Cat#J91030
5-Iodouracil AK Scientific Cat#K165
Ammonia, ca. 7N solution in methanol Sigma-Aldrich Cat#499145
Silver (I) oxide (Ag2O) Sigma-Aldrich Cat#226831
Methyl iodide (MeI) EMD Millipore Cat#IX0185
Diethylaminosulfur trifluoride (DAST) Oakwood Cat#002323
Methanesulfonyl chloride (MsCl) Sigma-Aldrich Cat#471259
Triethylamine (NEt3) Thermo Fisher Scientific Cat#04885
Acetyl chloride (AcCl) Sigma-Aldrich Cat#114189
Palladium hydroxide on carbon [Pd(OH)2/C], 5 wt.% Acros Organic Cat#199620100
Cyclohexene Sigma-Aldrich Cat#29240
Sodium azide (NaN3) Sigma-Aldrich Cat#71289
4-(2-Hydroxyethyl)piperazine-1-ethanesulfonic acid (HEPES) Fisher BioReagents Cat#BP310-100
Tris(hydroxymethyl)aminomethane base (Tris) Fisher BioReagents Cat#BP152-1
Dithiothreitol (DTT) Fisher BioReagents Cat#BP172-25
Magnesium chloride (MgCl2) Fisher Chemical Cat#M33-500
Potassium chloride (KCl) Fisher Chemical Cat#P217-500
Medronic acid (InfinityLab Deactivator Additive) Agilent Cat#5191-3940
Adenosine 15N5 5’-monophosphate disodium salt Sigma-Aldrich Cat#662658
Uridine 15N2 5’-monophosphate sodium salt Sigma-Aldrich Cat#662666

Critical Commercial Assays

MEGAscript T7 Transcription Kit Invitrogen Cat#AM1334
m7G(5')ppp(5')G RNA Cap Structure Analog New England BioLabs Cat#S1404S
CellTiter-Glo Promega Cat#G7570
Renilla-Glo Promega Cat#E2710
Renilla Promega Cat#E2820

Experimental Models: Cell Lines

A549 ATCC Cat#CCL-185
Vero E6 ATCC Cat#CRL-1586

Recombinant DNA

pET21a-UCK2 expression plasmid Okesli-Armlovich et al. (2019) N/A
pET28-CMPK1 expression plasmid Deans et al. (2016) N/A

Software

Prism 8.0 GraphPad https://www.graphpad.com/scientific-software/prism/
ChemDraw Professional 17.1 PerkinElmer https://www.perkinelmer.com/category/chemdraw
MNova 12.0 Mestrelab https://mestrelab.com/download_file/mnova-12-0-0/

Other

Centrifugal Filter Unit Amicon Cat#UFC900308
Hi Trap Q anion exchange column GE Healthcare Life Sciences Cat#17115301