. 2020 Feb 19;14(6):1384–1395. doi: 10.1038/s41396-020-0616-4

Table 1.

Horizontally transferred genes in the Homalodisca vitripennis (GWSS) genome.

Trinity ID	Gene	Product	Function	Predicted origin	FPKM (log₂ FC)
Trinity ID	Gene	Product	Function	Predicted origin	Body	Red	Yellow
DN151427_c3_g2	rnc	Ribonuclease III	RNA processing	Wolbachia^a	0	0.2 (-)	371.2 (14.3)
DN152407_c0_g1	ileS^b	Isoleucine-tRNA ligase	Translation	Wolbachia	0	0.1 (-)	206 (13.9)
DN93430_c0_g1	frr	Ribosome recycling factor	Translation	Alphaproteobacteria	0	0.3 (-)	152.9 (12.4)
DN157716_c1_g1	ATPase^b	AAA-ATPase	ATPase activity	Firmicutes^a	1.5	1.4 (-)	131.1 (6.6)
DN152668_c0_g5	def^b	Peptide deformylase	Translation factor	Rickettsia	2.4	5.2 (-)	226.6 (7.4)
DN145592_c1_g1	yebC	Transcriptional regulator	Transcription	Midichloria	0	0.3 (-)	442.5 (14.5)
DN147782_c0_g1	pel	Pectin lyase	Cell wall degradation	Pseudomonas	39.1	0 (−8.5)	0 (−8.9)
DN137942_c0_g1	gh25-1^b	Glycosyl hydrolase family 25	Lysozyme activity	Pseudomonas	63.3	123.7 (-)	0.9 (−6.2)
DN145340_c0_g1	gh25-2^b	Glycosyl hydrolase family 25	Lysozyme activity	Pseudomonas	2.2	1.1 (-)	11.3 (2.4)
DN161451_c3_g1	cel-1	Cellulase	Cell wall degradation	Streptomyces	84.2	0.1 (−10.1)	0.1 (−9.7)
DN161451_c3_g3	cel-2	Cellulase	Cell wall degradation	Streptomyces	329.5	0.4 (−9.5)	0.1 (−10.7)
DN152450_c0_g1	plc-1^b	Phosphatidylinositol-specific phospholipase C domain	Lipid metabolism	Providencia	5.8	0.3 (−3.9)	0 (−8)
DN155959_c1_g1	plc-2				29.3	2.8 (−3.3)	0.5 (−5.6)
DN155959_c1_g2	plc-3				127.4	19 (−2.8)	2.3 (−5.8)

FC is represented with “-” if p value is higher than 0.001.

FPKM fragments per kilobase per million, FC fold change in expression of bacteriomes relative to body tissues, Red red bacteriome, Yellow yellow bacteriome.

^aThe origin is predicted based on the blast result.

^bHTGs have typical GT/AG intron boundaries.