TABLE 2.
Haplotype allele 1 | Haplotype allele 2 | Categorical coding of haploblock1 | Numerical coding of haploblock |
|||
AB | Ab | aB | ab | |||
AB | AB | AB|AB | 2 | 0 | 0 | 0 |
AB | Ab | AB|Ab | 1 | 1 | 0 | 0 |
AB | aB | AB|aB | 1 | 0 | 1 | 0 |
AB | ab | AB|ab | 1 | 0 | 0 | 1 |
Ab | Ab | Ab|Ab | 0 | 2 | 0 | 0 |
Ab | aB | Ab|aB | 0 | 1 | 1 | 0 |
Ab | ab | Ab|ab | 0 | 1 | 0 | 1 |
aB | aB | aB|aB | 0 | 0 | 2 | 0 |
aB | ab | aB|ab | 0 | 0 | 1 | 1 |
ab | ab | ab|ab | 0 | 0 | 0 | 2 |
1separates the strands of DNA. Considering this haploblock (let {A, a} and {B, b} denote alleles harbored by the two SNPs, respectively), four possible types of gametes—AB, Ab, aB, and ab—could be generated and 10 types of genotypes are possibly formed in a large population (imprinting is not considered).