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. 2020 May 22;10:8542. doi: 10.1038/s41598-020-65381-7

Table 1.

Human breast cancer cell lines, normal and neoplastic tissues in which HN mRNA is detected.

SOURCE TISSUE TYPE SAMPLE SIZE PLATFORM ACCESSION NUMBER
PRIMARY TUMOR TYPE METASTASIS
CELL LINES BASAL BT-549 n = 1/cell line Illumina HiSeq 4000 PRJNA434599
HBL-100
SUM-159
LUMINAL BT-474
T47D
MCF7
MAMOPLASTY REDUCTION NORMAL ADULT BREAST EPITHELIUM n = 3 donors Illumina HiSeq 2500 PRJNA450412
PATIENT-DERIVED XENOGRAFT TNBC n = 11 patients Illumina HiSeq 2500 PRJNA451206
BASAL-LIKE HER2 +  n = 1 patient
LUMINAL B ER +  n = 8 patients
LUMINAL B HER +  n = 1 patient
ER + /PR- n = 1 patient
TNBC BRAIN METASTASIS n = 2 patients Illumina HiSeq 2500 PRJNA434130
PRIMARY TUMOR ER + TUMOR n = 12 patients Illumina HiSeq 2500 PRJNA327871
TUMORSPHERE
TNBC n = 6 patients Illumina HiSeq 2500 PRJNA305054
HER2 +  n = 2 patient
ER + /PR +  n = 2 patients
LUMINAL B HER +  n = 1 patient
METASTASES LUNG n = 3 patients Illumina HiSeq 2500 PRJNA377764
PLEURA n = 14 patients
LYMPH NODE n = 15 patients
SKIN n = 5 patients
LIVER n = 6 patients
OVARY n = 2 patients
CHEST WALL n = 3 patients