Table 5:
hyperSMURF and parSMURF (with grid search and Bayesian optimization) prediction performance obtained over a fully independent Mendelian test set composed of newly annotated pathogenic variants (positive examples) and common neutral variants (negative examples)
Model | AUROC | AUPRC |
---|---|---|
hyperSMURF | 0.945216 | 0.098153 |
parSMURF, grid search | 0.941026 | 0.409067 |
parSMURF, Bayesian optimizaion | 0.928158 | 0.192568 |