Table 3.
The detailed information of the top 20 upregulated DEGs
| Upregulated gene | Gene ID | Location | Log2 fold change (CPIP/Sham) | Q value | Official gene name (NCBI) |
|---|---|---|---|---|---|
| LOC100363502 | 100363502 | 62475574–62476771 | 10.9252125 | 9.77E− 139 | |
| LOC103689943 | 103689943 | 28267–72912 | 9.9331474 | 2.03E− 81 | |
| Isoc1 | 364879 | 53727203–53747612 | 9.72392644 | 1.35E− 72 | Isochorismatase domain-containing protein 1 |
| LOC100911615 | 100911615 | 213997721–214002811 | 9.07094965 | 1.79E− 50 | |
| LOC100911825 | 100911825 | 91219838–91237274 | 8.61974834 | 2.04E− 24 | |
| LOC685963 | 685963 | 164002409–164002748 | 8.46420752 | 9.52E− 36 | |
| LOC103689965 | 103689965 | 4495440–4508232 | 7.92974175 | 3.41E− 26 | |
| Stra8 | 500079 | 62447724–62474802 | 7.58808827 | 2.55E− 42 | Stimulated by retinoic acid 8 |
| LOC100909795 | 100909795 | 78550661–78577178 | 7.48236683 | 4.25E− 20 | |
| Rpl30 | 64640 | 73213538–73216431 | 6.85524869 | 0 | Ribosomal protein L30 |
| LOC108348184 | 108348184 | 1622570–1683919 | 6.59189138 | 9.95E− 12 | |
| LOC103690173 | 103690173 | 3738–18580 | 6.44436116 | 1.03E− 10 | |
| LOC103694874 | 103694874 | 23060–31871 | 5.87292704 | 1.62E− 07 | |
| Cxcl13 | 498335 | 15253146–15258221 | 5.78195338 | 1.23E− 117 | C-X-C motif chemokine ligand 13 |
| Rsph4a | 309767 | 32450701–32467362 | 5.59130694 | 2.57E− 06 | Radial spoke head component 4A |
| LOC100912393 | 100912393 | 3940948–3965964 | 5.45532247 | 8.21E− 06 | |
| Rps20 | 122772 | 16706052–16707214 | 5.41559782 | 1.14E− 05 | Ribosomal protein S20 |
| Batf | 299206 | 109562415–109584541 | 5.13596145 | 8.93E− 05 | Basic leucine zipper ATF-like transcription factor |
| Aqp3 | 65133 | 57423735–57429252 | 5.13596145 | 8.93E− 05 | Aquaporin-3 |
| Crkl | 287942 | 87338606–87356644 | 4.94331637 | 0.00030049 | Crk-like proto-oncogene, adaptor protein |