Table. 3.
Calculated binding energies (G and ΔG) and their torsional angles (ΦT and ΦP) for the top seven compounds in the presence of Flu A vRNA with extended primer that are active against influenza-A virus replication using TCA precipitation assay
| Compounds | IUPAC name | ΦT | ΦP |
G Kcal/mol |
ΔG Kcal/mol |
IC25 (µM) |
IC50 (µM) |
|---|---|---|---|---|---|---|---|
| 1 | Cyanine 3-Aminoallylcytidine-5′-Triphosphate | −144.2 | 133.8 | −23.4 | 7.6 | 0.03 | 1.69 |
| 2 | Cyanine 7-Aminoallyluridine-5′-Triphosphate | −172.9 | 56.4 | −26.1 | 10.3 | 0.88 | 3.58 |
| 3 | Cyanine 5-5-Propargylamino-2′-deoxycytidine-5′-Triphosphate | −149.9 | 128.7 | −25.6 | 9.8 | 0.68 | 2.13 |
| 4 | Desthiobiotin-6-Aminoallyl-2′-deoxycytidine-5′-Triphosphate | 174.8 | 153.8 | −17.4 | 1.6 | 0.06 | 0.21 |
| 5 | N4-Biotin-OBEA-2′-deoxycytidine-5′-Triphosphate | 131.7 | 174.5 | −21.6 | 5.8 | 0.02 | 0.09 |
| 6 | P1, P5-Di(adenosine-5′) Penta phosphate | 152.1 | 60.9 | −26.0 | 10.2 | 0.03 | 0.09 |
| 7 | 5′-Dimethoxytrityl-2′-tosyl-N2-isobutyryl-guanosine | −94.6 | −46.5 | −14.3 | −1.5 | 0.25 | 0.68 |
ΔG = G (+ve control, −15.8 Kcal/Mol)—G (drug)