| Aβ | Amyloid–beta |
| AD | Alzheimer’s Disease |
| ALS | Amyotrophic Lateral Sclerosis |
| APP | Amyloid Precursor Protein |
| APPL | Amyloid–beta–like protein |
| A–T | Ataxia Telangiectasia |
| BACE | Beta–secretase |
| Cas9 | CRISPR Associated Protein 9 |
| CD2AP | CD2-Associated Protein |
| CELF1 | CUGBP Elav-Like Family member 1 |
| CRISPR | Clustered Regularly Interspaced Short Palindromic Repeats |
| CTE | Chronic Traumatic Encephalopathy |
| C9ORF72 | Chromosome 9 Open Reading Frame 72 |
| DA neurons | Dopaminergic neurons |
| DAT | Dopamine transporter |
| DCP–1 | Death caspase–1 |
| DPR | Dipeptide repeat expansion |
| eGFP | Enhanced green fluorescent protein |
| EJP | Excitatory junction potential |
| FERMT2 | Fermitin family homolog 2 |
| FITC | Fluorescein isothiocyanate |
| FM1–43 | Fluorescent dye used for the real–time measurement of exocytosis and endocytosis in living cells |
| FUS | Fused in Sarcoma |
| GBA | Glucosylceramidase beta |
| GFP | Green fluorescent protein |
| GWAS | Genome–Wide Association Study |
| H&E | Hematoxylin and Eosin |
| HD | Huntington’s disease |
| HPLC | High–performance liquid chromatography |
| IFM | Indirect flight muscle |
| ITGAM | Integrin alpha M |
| ITGA9 | Integrin alpha 9 |
| LRRK 2 | Leucine-rich repeat kinase 2 |
| MAST4 | Microtubule-associated serine/threonine kinase family member 4 |
| MEGF10 | Multiple EGF-like-domains 10 |
| mTORC1 | Mammalian target of rapamycin Complex 1 |
| NMJ | Neuromuscular junction |
| Ommatidia | Clusters of photoreceptors and supporting cells that compose the adult eye |
| PARP | Poly(ADP–ribose) polymerase |
| PD | Parkinson’s disease |
| PER | Period |
| PINK1 | PTEN-induced kinase 1 |
| pTAU | Phosphorylated Tau |
| pTBI | Penetrating Traumatic Brain Injury |
| PTPRD | Receptor-type protein tyrosine phosphatase delta |
| RFP | Red Fluorescent Protein |
| RNA | Ribonucleic acid |
| RT–PCR | Reverse transcription PCR |
| SEM | Scanning Electron Microscopy |
| siRNA | Small interfering RNA |
| SNRPRN | Small nuclear ribonucleoprotein polypeptide N |
| SOD | Superoxide dismutase |
| TBI | Traumatic Brain Injury |
| TEM | Transmission Electron Microscopy |
| TH | Tyrosine hydroxylase |
| TRIM-NHL | Tripartite motif-NCL-1/HT2A/LIN-41 |
| TUNEL | Terminal deoxynucleotidyl transferase dUTP nick end labeling |
| UAS | Upstream activating sequence |
| UBQLN2 | Ubiquilin 2 |
| UCH-L1 | Ubiquitin carboxy-terminal hydrolase L1 |
| VAPB | Vesicle-associated membrane protein-associated protein B/C |
| VCP | Valosin-containing protein |
| XYLT1 | Xylosyltransferase 1 |
| X–34 | Fluorescent dye used to stain for amyloid depositions |