Table 1.
List of differentially expressed acetylation sites from 3 paired samples
| Protein names | Protein accession | Peptides |
|---|---|---|
| Protein S100-A9 | P06702 |
NEK(ac)VIEHIMEDLDTNADK TCK(ac)MSQLER |
| Acyl-CoA-binding protein | P07108 | AK(ac)WDAWNELK |
| Protein SON | P18583 | RLTDLDK(ac)AQLLEIAK |
| Nucleoprotein TPR | P12270 | NQK(ac)LTATTQK(ac)QEQIINTMTQDLR |
| Mastermind-like protein 1 | Q92585 | ALAGVVLPSQGPGGASELSSAHQLQQIAAK(ac)QK |
| Malate dehydrogenase | Q0QF37 | VSSFEEK(ac)MISDAIPELK |
| 39S ribosomal protein L47, mitochondrial | Q9HD33 | VVDSMDALDK(ac)VVQER |
| Histone H1.3 | P16402 | SETAPLAPTIPAPAEK(ac)TPVK |
| CREB-binding protein | Q92793 |
FVYTCNECK(ac)HHVETR NNK(ac)K(ac)TNK(ac)NK(ac)SSISR |
| Histone acetyltransferase p300 | Q09472 | NAK(ac)KKNNKK |
| cDNA FLJ55438, highly similar to Splicing factor 3 subunit 1 | B4E091 | TDIFGVEETAIGK(ac)K |
| Histone cluster 1, H2bd | A8K9J7 |
SAPAPK(ac)KGSKKAVTK LLLPGELAK(ac)HAVSEGTK |
| Histone H2B type 1-B | P33778 | SAPAPK(ac)KGSKKAITK |
| Histone cluster 2, H2bf | B4DR52 | SAPAPK(ac)KGSKKAVTK |
| Histone H2B type 1-L | Q99880 | SAPAPK(ac)KGSKKAVTK |
| Dihydropyrimidine dehydrogenase [NADP(+)] | Q12882 | EEK(ac)CEFLPFLSPR |
| 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase (Hydroxymethylglutaricaciduria), isoform CRA_b | B1AK13 | DGLQNEK(ac)NIVSTPVK |
| cDNA FLJ58863, highly similar to Protein NipSnap3A | B4DW81 | SYYLKPSK(ac)MNEFLENFEK |
| Annexin | Q5TZZ9 | AAYLQETGKPLDETLK(ac)K |
| cDNA FLJ54081, highly similar to Keratin, type II cytoskeletal 5 | B4E1T1 |
NK(ac)LAELEEALQK LAELEEALQK(ac)AK GELALK(ac)DAR |
| cDNA FLJ75211, highly similar to Homo sapiens ubiquitin specific peptidase like 1, mRNA | A8K1B1 | GK(ac)LK(ac)ALK |
| PRO1975 | Q9UHS8 | NCIHTDDDEK(ac)ISYR |
| ATP synthase subunit beta | V9HW31 | VLDSGAPIK(ac)IPVGPETLGR |
| ATP synthase subunit O, mitochondrial | P48047 | QNK(ac)LEQVEK |
| NAD kinase | J3KSP9 | MRDASLLQPFK(ac)ELCTHLMEK(ac)SRR |
| NUMA1 protein | Q3SYK8 | CLEEK(ac)NEILQGK |
| Heterogeneous nuclear ribonucleoprotein U (Scaffold attachment factor A), isoform CRA_a | Q7Z4Q5 | APQCLGK(ac)FIEIAAR |
| Fatty acid synthase | A0A0U1RQF0 | DIMLATGK(ac)LSPDAIPGK |
| Chloride intracellular channel protein | Q5SRT3 | NSNPALNDNLEK(ac)GLLK |
| Prelamin-A/C | P02545 | ASSHSSQTQGGGSVTK(ac)K |
1. Acetylated lysine is marked with ‘‘ac’’
2. Lysine acetylation of P02545 is downregulated, others are upregulated in tumor tissues compared with adjacent normal tissues